SMTL ID : 3ilq.1

Structure of mCD1d with bound glycolipid BbGL-2c from Borrelia burgdorferi

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.05 Å
Oligo State
hetero-oligomer
Ligands
2 x NAG: SUGAR (N-ACETYL-D-GLUCOSAMINE)(Post Translational Modification)
1 x NAG- NAG: SUGAR (2-MER)(Post Translational Modification)
1 x 1O2: (2S)-3-(ALPHA-D-GALACTOPYRANOSYLOXY)-2-(HEXADECANOYLOXY)PROPYL (9Z)-OCTADEC-9-ENOATE(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Wang, J. et al., Lipid binding orientation within CD1d affects recognition of Borrelia burgorferi antigens by NKT cells. Proc.Natl.Acad.Sci.USA (2010)
Release Date
2010-01-26
Peptides
T-cell surface glycoprotein CD1d1: A
Beta-2 microglobulin: B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
C
B
D