SMTL ID : 3l5c.2 (1 other biounit)

Structure of BACE Bound to SCH723871

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x TAR: D(-)-TARTARIC ACID(Non-covalent)

TAR.1: 5 residues within 4Å: Chain A: R.28, N.49, H.70, R.71, N.135 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:N.49, A:H.70, A:N.135 Water bridges: A:R.71, A:R.71, A:R.71, A:N.135 Salt bridges: A:R.28, A:H.70, A:R.71, A:R.71

1 x BDQ: 1-(4-cyanophenyl)-3-(4-{[(2Z,4R)-2-imino-4-methyl-4-(2-methylpropyl)-5-oxoimidazolidin-1-yl]methyl}benzyl)urea(Non-covalent)

BDQ.2: 12 residues within 4Å: Chain A: L.51, D.53, G.55, Y.92, K.128, F.129, W.136, I.139, Y.219, I.247, D.249, G.251 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.51, A:Y.92, A:F.129, A:I.139, A:Y.219, A:I.247 Hydrogen bonds: A:K.128, A:F.129 Salt bridges: A:D.53, A:D.249

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, Z. et al., Discovery of Cyclic Acylguanidines as Highly Potent and Selective beta-Site Amyloid Cleaving Enzyme (BACE) Inhibitors: Part I-Inhibitor Design and Validation. J.Med.Chem. (2010)

Release Date

2010-02-16

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Beta-secretase 1

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