SMTL ID : 3lpi.3 (2 other biounits)

Structure of BACE Bound to SCH745132

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x TLA: L(+)-TARTARIC ACID(Non-covalent)

TLA.1: 5 residues within 4Å: Chain A: R.69, N.90, H.111, R.112, N.176 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:N.90, A:H.111, A:N.176 Water bridges: A:R.112, A:R.112, A:R.112, A:N.176 Salt bridges: A:R.69, A:H.111, A:R.112, A:R.112

1 x Z74: N'-{(1S,2S)-1-(3,5-difluorobenzyl)-2-hydroxy-2-[(2R)-4-(phenylsulfonyl)piperazin-2-yl]ethyl}-5-methyl-N,N-dipropylbenzene-1,3-dicarboxamide(Non-covalent)

Z74.2: 25 residues within 4Å: Chain A: G.73, Q.74, G.75, L.92, D.94, G.96, S.97, P.132, Y.133, T.134, Q.135, G.136, K.169, F.170, I.172, W.177, I.188, R.190, Y.260, I.288, D.290, G.292, T.293, T.294, R.297 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:L.92, A:Y.133, A:T.134, A:Q.135, A:F.170, A:I.172, A:Y.260 Hydrogen bonds: A:D.94, A:T.134, A:T.134, A:Q.135, A:Y.260, A:D.290, A:G.292, A:T.294 Water bridges: A:N.295 pi-Stacking: A:Y.133

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cumming, J. et al., Piperazine sulfonamide BACE1 inhibitors: design, synthesis, and in vivo characterization. Bioorg.Med.Chem.Lett. (2010)

Release Date

2010-04-14

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Beta-secretase 1

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