SMTL ID : 3skg.4 (3 other biounits)

Crystal structure of beta-site app-cleaving enzyme 1 (BACE-WT) complex with (2S)-2-((3R)-3-acetamido-3-isobutyl-2-oxo-1-pyrrolidinyl)-N-((1S,2R)-1-(3,5-difluorobenzyl)-2-hydroxy-2-(1,2,3,4-tetrahydro-3-isoquinolinyl)ethyl)-4-phenylbutanamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.88 Å

Oligo State

monomer

Ligands

1 x PB8: (2S)-2-[(3R)-3-(ACETYLAMINO)-3-(2-METHYLPROPYL)-2-OXOPYRROLIDIN-1-YL]-N-{(1R,2S)-3-(3,5-DIFLUOROPHENYL)-1-HYDROXY-1-[(3R)-1,2,3,4-TETRAHYDROISOQUINOLIN-3-YL]PROPAN-2-YL}-4-PHENYLBUTANAMIDE(Non-covalent)

PB8.1: 22 residues within 4Å: Chain A: S.72, Q.74, G.75, L.92, D.94, G.96, S.97, Y.133, T.134, Q.135, G.136, K.169, F.170, I.172, W.177, Y.260, I.288, D.290, G.292, T.293, T.294, R.297 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:L.92, A:Y.133, A:Y.133, A:T.134, A:Q.135, A:F.170, A:I.172, A:Y.260 Hydrogen bonds: A:G.96, A:G.96, A:T.134, A:Q.135, A:G.292, A:T.294, A:T.294, A:T.294 pi-Stacking: A:Y.133

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Thompson, L.A. et al., Synthesis and in vivo evaluation of cyclic diaminopropane BACE-1 inhibitors. Bioorg.Med.Chem.Lett. (2011)

Release Date

2011-09-07

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

Beta-secretase 1

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