SMTL ID : 3r0y.1

Crystal Structures of Multidrug-resistant HIV-1 Protease in Complex with Mechanism-Based Aspartyl Protease Inhibitors

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-dimer

Ligands

1 x RSZ: N-[(2S)-1-{[(2S,3S)-3-hydroxy-5-oxo-5-{[(2R)-1-oxo-3-phenyl-1-(prop-2-yn-1-ylamino)propan-2-yl]amino}-1-phenylpentan-2-yl]amino}-3-methyl-1-oxobutan-2-yl]pyridine-2-carboxamide(Non-covalent)

RSZ.1: 14 residues within 4Å: Chain A: N.25, G.27, I.50, T.80, P.81, T.82, V.84 Chain B: N.25, G.27, I.47, G.48, T.80, P.81, T.82 9 PLIP interactions: 5 interactions with chain A, 4 interactions with chain B Hydrophobic interactions: A:I.50, A:P.81, A:T.82, A:V.84, B:I.47, B:P.81 Hydrogen bonds: A:N.25, B:N.25, B:N.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yedidi, R.S. et al., Crystal structures of multidrug-resistant HIV-1 protease in complex with two potent anti-malarial compounds. Biochem.Biophys.Res.Commun. (2012)

Release Date

2012-04-04

Peptides

Multidrug-resistant clinical isolate 769 HIV-1 Protease: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Multidrug-resistant clinical isolate 769 HIV-1 Protease

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