- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.58 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
- 1 x NCO: COBALT HEXAMMINE(III)(Non-covalent)
- 2 x MRO: 2,6-dioxo-5-(2-phenylethyl)-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid(Non-covalent)
MRO.3: 12 residues within 4Å:- Chain A: K.44, N.68, S.69, M.70, G.71, L.72, N.128, S.130, P.132, N.195, S.196
- Ligands: FMN.1
12 PLIP interactions:12 interactions with chain A- Hydrophobic interactions: A:L.72
- Hydrogen bonds: A:N.68, A:N.68, A:M.70, A:G.71, A:L.72, A:N.128, A:N.195, A:N.195, A:S.196
- Water bridges: A:N.68
- Salt bridges: A:K.44
MRO.8: 14 residues within 4Å:- Chain B: K.44, N.68, S.69, M.70, G.71, L.72, N.128, S.130, C.131, P.132, N.195, S.196
- Ligands: FMN.7, GOL.10
13 PLIP interactions:13 interactions with chain B- Hydrophobic interactions: B:L.72, B:P.132
- Hydrogen bonds: B:N.68, B:N.68, B:N.68, B:M.70, B:G.71, B:L.72, B:N.128, B:N.195, B:N.195, B:S.196
- Salt bridges: B:K.44
- 6 x GOL: GLYCEROL(Non-functional Binders)
GOL.4: 4 residues within 4Å:- Chain A: C.32, A.35, S.36, P.280
2 PLIP interactions:2 interactions with chain A- Water bridges: A:S.37, A:P.280
GOL.5: 6 residues within 4Å:- Chain A: I.172, R.239, R.240
- Chain B: K.215, Q.216, F.218
4 PLIP interactions:2 interactions with chain B, 2 interactions with chain A- Water bridges: B:Q.216, B:Q.216
- Hydrogen bonds: A:R.240, A:R.240
GOL.6: 2 residues within 4Å:- Chain A: Y.238, P.242
4 PLIP interactions:4 interactions with chain A- Water bridges: A:Y.238, A:P.242, A:K.244, A:K.244
GOL.9: 6 residues within 4Å:- Chain A: K.215, Q.216, F.218
- Chain B: I.172, R.239, R.240
5 PLIP interactions:2 interactions with chain B, 3 interactions with chain A- Hydrogen bonds: B:R.240, B:R.240
- Water bridges: A:Q.216, A:Q.216, A:Q.216
GOL.10: 7 residues within 4Å:- Chain B: S.130, P.167, N.195, S.196, G.198, G.220
- Ligands: MRO.8
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:S.130, B:S.196, B:S.196, B:G.220
- Water bridges: B:N.68, B:N.68, B:G.198, B:N.199
GOL.11: 3 residues within 4Å:- Chain B: Y.238, R.239, P.242
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:R.239, B:P.242
- Water bridges: B:Y.238
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Inaoka, D.K. et al., Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-3-045a. To be Published
- Release Date
- 2013-11-20
- Peptides
- Dihydroorotate dehydrogenase (fumarate): AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.58 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
- 1 x NCO: COBALT HEXAMMINE(III)(Non-covalent)
- 2 x MRO: 2,6-dioxo-5-(2-phenylethyl)-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid(Non-covalent)
- 6 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Inaoka, D.K. et al., Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-3-045a. To be Published
- Release Date
- 2013-11-20
- Peptides
- Dihydroorotate dehydrogenase (fumarate): AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B