- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.61 Å
- Oligo State
- homo-dimer
- Ligands
- 16 x GOL: GLYCEROL(Non-functional Binders)
- 2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
FMN.11: 22 residues within 4Å:- Chain A: A.19, A.20, G.21, K.44, S.45, Y.59, N.68, M.70, N.128, K.165, V.194, N.195, S.196, G.222, G.223, I.226, C.249, G.250, G.251, G.272, T.273
- Ligands: W7K.13
21 PLIP interactions:21 interactions with chain A- Hydrophobic interactions: A:Y.59, A:Y.59
- Hydrogen bonds: A:A.20, A:S.45, A:S.45, A:S.45, A:K.165, A:K.165, A:N.195, A:G.223, A:G.251, A:G.272, A:T.273, A:T.273
- Water bridges: A:A.20, A:K.44, A:S.98, A:G.250, A:V.252, A:V.252, A:V.252
FMN.20: 23 residues within 4Å:- Chain B: A.19, A.20, G.21, K.44, S.45, Y.59, N.68, M.70, N.128, K.165, V.194, N.195, S.196, G.222, G.223, I.226, C.249, G.250, G.251, V.271, G.272, T.273
- Ligands: W7K.21
21 PLIP interactions:21 interactions with chain B- Hydrophobic interactions: B:Y.59, B:Y.59
- Hydrogen bonds: B:A.20, B:S.45, B:S.45, B:S.45, B:K.165, B:K.165, B:N.195, B:G.223, B:G.251, B:G.272, B:T.273, B:T.273
- Water bridges: B:A.20, B:K.44, B:S.98, B:G.250, B:G.250, B:V.252, B:V.252
- 1 x NCO: COBALT HEXAMMINE(III)(Non-covalent)
- 2 x W7K: 5-[2-(3,6-dimethoxynaphthalen-2-yl)ethyl]-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid(Non-covalent)
W7K.13: 12 residues within 4Å:- Chain A: K.44, N.54, N.68, M.70, G.71, L.72, N.128, S.130, P.132, N.195, S.196
- Ligands: FMN.11
13 PLIP interactions:13 interactions with chain A- Hydrophobic interactions: A:L.72
- Hydrogen bonds: A:N.54, A:N.68, A:N.68, A:N.68, A:M.70, A:G.71, A:L.72, A:N.128, A:N.195, A:N.195, A:S.196
- Salt bridges: A:K.44
W7K.21: 15 residues within 4Å:- Chain B: K.44, N.54, N.68, S.69, M.70, G.71, L.72, N.128, S.130, C.131, P.132, N.195, S.196, K.215
- Ligands: FMN.20
15 PLIP interactions:15 interactions with chain B- Hydrophobic interactions: B:L.72, B:L.72, B:P.132
- Hydrogen bonds: B:N.54, B:N.68, B:N.68, B:N.68, B:M.70, B:G.71, B:L.72, B:N.128, B:N.195, B:N.195, B:S.196
- Salt bridges: B:K.44
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Inaoka, D.K. et al., Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-6-066. To be Published
- Release Date
- 2014-03-05
- Peptides
- Dihydroorotate dehydrogenase (fumarate): AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.61 Å
- Oligo State
- homo-dimer
- Ligands
- 16 x GOL: GLYCEROL(Non-functional Binders)
- 2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
- 1 x NCO: COBALT HEXAMMINE(III)(Non-covalent)
- 2 x W7K: 5-[2-(3,6-dimethoxynaphthalen-2-yl)ethyl]-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Inaoka, D.K. et al., Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-6-066. To be Published
- Release Date
- 2014-03-05
- Peptides
- Dihydroorotate dehydrogenase (fumarate): AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B