SMTL ID : 4ium.1

Equine arteritis virus papain-like protease 2 (PLP2) covalently bound to ubiquitin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.59, P.60, C.89, C.94, C.96 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.59, A:C.89, A:C.94, A:C.96

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 9 residues within 4Å: Chain A: M.18, N.19, G.20, S.46, T.48, K.63, Y.64, P.104, P.106 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.63, A:Y.64 Water bridges: A:S.46 GOL.3: 9 residues within 4Å: Chain A: I.53 Chain B: T.7, L.8, T.9, E.34, I.36, L.69, V.70, L.71 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:T.7, B:L.8, B:T.9 Water bridges: B:T.7

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

van Kasteren, P.B. et al., Deubiquitinase function of arterivirus papain-like protease 2 suppresses the innate immune response in infected host cells. Proc.Natl.Acad.Sci.USA (2013)

Release Date

2013-02-13

Peptides

papain-like protease 2: A
Ubiquitin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

papain-like protease 2

Ubiquitin

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