SMTL ID : 5ohk.1

Crystal structure of USP30 in covalent complex with ubiquitin propargylamide (high resolution)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.34 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.139, C.142, C.189, C.192 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.139, A:C.142, A:C.189, A:C.192

1 x AYE: prop-2-en-1-amine(Covalent)

AYE.2: 7 residues within 4Å: Chain A: N.11, N.14, C.16, E.98, G.285, H.286 Chain B: G.75 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.285

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gersch, M. et al., Mechanism and regulation of the Lys6-selective deubiquitinase USP30. Nat. Struct. Mol. Biol. (2017)

Release Date

2017-09-20

Peptides

Ubiquitin carboxyl-terminal hydrolase 30,Ubiquitin carboxyl-terminal hydrolase 30,Ubiquitin carboxyl-terminal hydrolase 30: A
Polyubiquitin-B: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Ubiquitin carboxyl-terminal hydrolase 30,Ubiquitin carboxyl-terminal hydrolase 30,Ubiquitin carboxyl-terminal hydrolase 30

Polyubiquitin-B

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