SMTL ID : 4n00.1

Discovery of 7-THP chromans: BACE1 inhibitors that reduce A-beta in the CNS

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x NI: NICKEL (II) ION(Non-covalent)

NI.1: 2 residues within 4Å: Chain A: H.402, H.404 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.402, A:H.404

1 x 2EX: (4R,4a'S,10a'S)-2-amino-8'-(2-fluoropyridin-3-yl)-1-methyl-3',4',4a',10a'-tetrahydro-1'H-spiro[imidazole-4,10'-pyrano[4,3-b]chromen]-5(1H)-one(Non-covalent)

2EX.2: 17 residues within 4Å: Chain A: G.17, Q.18, G.19, L.36, D.38, G.40, S.41, Y.77, W.82, F.114, I.116, W.121, I.124, D.234, G.236, T.237, T.238 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.36, A:Y.77, A:F.114, A:I.116, A:W.121, A:W.121, A:I.124 Hydrogen bonds: A:G.236 Water bridges: A:G.19, A:S.41 Salt bridges: A:D.38, A:D.234

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Thomas, A.A. et al., Discovery of 7-tetrahydropyran-2-yl chromans: beta-site amyloid precursor protein cleaving enzyme 1 (BACE1) inhibitors that reduce amyloid beta-protein (A beta ) in the central nervous system. J.Med.Chem. (2014)

Release Date

2014-05-14

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1

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