- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-tetramer
- Ligands
- 18 x DMN: DIMETHYLAMINE(Non-covalent)(Non-functional Binders)
- 26 x GLY: GLYCINE(Non-covalent)
GLY.2: 3 residues within 4Å:- Chain A: E.6, Q.8
- Ligands: MPD.11
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:E.6, A:E.6, A:Q.8
GLY.3: 1 residues within 4Å:- Chain A: L.37
2 PLIP interactions:2 Ligand-Ligand interactions- Hydrogen bonds: G.3, G.3
GLY.4: 3 residues within 4Å:- Chain A: R.32, P.33, I.34
5 PLIP interactions:1 Ligand-Ligand interactions, 3 interactions with chain A, 1 interactions with chain D- Hydrogen bonds: G.4, A:R.32, A:I.34, D:D.56
- Salt bridges: A:R.32
GLY.5: 5 residues within 4Å:- Chain A: L.31, F.39, P.51, P.52
- Ligands: MPD.12
3 PLIP interactions:2 interactions with chain A, 1 Ligand-Ligand interactions- Hydrogen bonds: A:T.50
- Water bridges: A:E.29, G.5
GLY.6: 5 residues within 4Å:- Chain A: L.44, T.45, I.70, F.74
- Chain D: I.70
No protein-ligand interaction detected (PLIP)GLY.7: 2 residues within 4Å:- Chain A: T.17, S.20
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:T.17, A:S.20
GLY.8: 5 residues within 4Å:- Chain A: I.77, L.80, A.81, Q.85
- Chain D: I.68
2 PLIP interactions:1 interactions with chain A, 1 interactions with chain D- Hydrogen bonds: A:Q.85, D:I.68
GLY.9: 1 residues within 4Å:- Chain A: R.32
No protein-ligand interaction detected (PLIP)GLY.10: 3 residues within 4Å:- Chain A: I.15, L.37
- Ligands: DMN.13
No protein-ligand interaction detected (PLIP)GLY.17: 4 residues within 4Å:- Chain B: S.20, F.61, L.64, I.68
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:S.20, B:S.20
GLY.18: 1 residues within 4Å:- Chain B: I.23
No protein-ligand interaction detected (PLIP)GLY.19: 1 residues within 4Å:- Chain B: F.67
No protein-ligand interaction detected (PLIP)GLY.20: 2 residues within 4Å:- Chain B: I.15, I.19
No protein-ligand interaction detected (PLIP)GLY.26: 3 residues within 4Å:- Chain C: E.6, Q.8
- Ligands: MPD.35
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:E.6, C:Q.8
GLY.27: 1 residues within 4Å:- Chain C: L.37
2 PLIP interactions:2 Ligand-Ligand interactions- Hydrogen bonds: G.27, G.27
GLY.28: 3 residues within 4Å:- Chain C: R.32, P.33, I.34
5 PLIP interactions:1 Ligand-Ligand interactions, 3 interactions with chain C, 1 interactions with chain B- Hydrogen bonds: G.28, C:R.32, C:I.34, B:D.56
- Salt bridges: C:R.32
GLY.29: 5 residues within 4Å:- Chain C: L.31, F.39, P.51, P.52
- Ligands: MPD.36
3 PLIP interactions:1 interactions with chain C, 2 Ligand-Ligand interactions- Hydrogen bonds: C:T.50
- Water bridges: G.29, G.29
GLY.30: 5 residues within 4Å:- Chain B: I.70
- Chain C: L.44, T.45, I.70, F.74
No protein-ligand interaction detected (PLIP)GLY.31: 2 residues within 4Å:- Chain C: T.17, S.20
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:T.17, C:S.20
GLY.32: 5 residues within 4Å:- Chain B: I.68
- Chain C: I.77, L.80, A.81, Q.85
2 PLIP interactions:1 interactions with chain C, 1 interactions with chain B- Hydrogen bonds: C:Q.85, B:I.68
GLY.33: 1 residues within 4Å:- Chain C: R.32
1 PLIP interactions:1 interactions with chain C- Water bridges: C:D.35
GLY.34: 3 residues within 4Å:- Chain C: I.15, L.37
- Ligands: DMN.37
No protein-ligand interaction detected (PLIP)GLY.41: 4 residues within 4Å:- Chain D: S.20, F.61, L.64, I.68
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:S.20, D:S.20
GLY.42: 1 residues within 4Å:- Chain D: I.23
No protein-ligand interaction detected (PLIP)GLY.43: 1 residues within 4Å:- Chain D: F.67
No protein-ligand interaction detected (PLIP)GLY.44: 2 residues within 4Å:- Chain D: I.15, I.19
No protein-ligand interaction detected (PLIP)- 4 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
MPD.11: 3 residues within 4Å:- Chain A: F.7, N.83
- Ligands: GLY.2
3 PLIP interactions:2 interactions with chain A, 1 Ligand-Ligand interactions- Hydrophobic interactions: A:F.7, A:N.83
- Hydrogen bonds: G.2
MPD.12: 5 residues within 4Å:- Chain A: D.35, T.50, P.51
- Chain D: P.52
- Ligands: GLY.5
5 PLIP interactions:2 interactions with chain A, 2 Ligand-Ligand interactions, 1 interactions with chain D- Hydrophobic interactions: A:D.35, A:T.50, D:P.52
- Hydrogen bonds: G.5, G.5
MPD.35: 3 residues within 4Å:- Chain C: F.7, N.83
- Ligands: GLY.26
3 PLIP interactions:2 interactions with chain C, 1 Ligand-Ligand interactions- Hydrophobic interactions: C:F.7, C:N.83
- Hydrogen bonds: G.26
MPD.36: 5 residues within 4Å:- Chain B: P.52
- Chain C: D.35, T.50, P.51
- Ligands: GLY.29
5 PLIP interactions:2 Ligand-Ligand interactions, 2 interactions with chain C, 1 interactions with chain B- Hydrogen bonds: G.29, G.29
- Hydrophobic interactions: C:D.35, C:T.50, B:P.52
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Napolitano, L.M. et al., A structural, functional, and computational analysis suggests pore flexibility as the base for the poor selectivity of CNG channels. Proc.Natl.Acad.Sci.USA (2015)
- Release Date
- 2015-07-01
- Peptides
- Potassium channel protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
DC
CD
D - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-tetramer
- Ligands
- 18 x DMN: DIMETHYLAMINE(Non-covalent)(Non-functional Binders)
- 26 x GLY: GLYCINE(Non-covalent)
- 4 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Napolitano, L.M. et al., A structural, functional, and computational analysis suggests pore flexibility as the base for the poor selectivity of CNG channels. Proc.Natl.Acad.Sci.USA (2015)
- Release Date
- 2015-07-01
- Peptides
- Potassium channel protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
DC
CD
D - Membrane
-
We predict this structure to be a membrane protein.