SMTL ID : 5di7.1

Crystal Structure of the ER-alpha Ligand-binding Domain in complex with an methyl-substituted A-CD ring estrogen derivative (1S,3aR,5S,7aS)-5-(4-hydroxy-2-methylphenyl)-7a-methyloctahydro-1H-inden-1-ol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.24 Å

Oligo State

hetero-2-2-mer

Ligands

2 x 5CQ: (1S,3aR,5S,7aS)-5-(4-hydroxy-2-methylphenyl)-7a-methyloctahydro-1H-inden-1-ol(Non-covalent)

5CQ.1: 12 residues within 4Å: Chain A: M.46, L.49, A.53, E.56, L.90, M.91, L.94, R.97, F.107, G.224, H.227, L.228 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.49, A:A.53, A:L.90, A:F.107 Hydrogen bonds: A:E.56, A:R.97, A:H.227 Water bridges: A:R.97 pi-Stacking: A:F.107 5CQ.2: 12 residues within 4Å: Chain B: M.46, L.49, A.53, E.56, L.90, M.91, L.94, R.97, F.107, G.224, H.227, L.228 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:L.49, B:A.53, B:L.90, B:L.94, B:F.107 Hydrogen bonds: B:E.56, B:R.97 Water bridges: B:L.94 pi-Stacking: B:F.107

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nwachukwu, J.C. et al., Predictive features of ligand-specific signaling through the estrogen receptor. Mol.Syst.Biol. (2016)

Release Date

2016-05-04

Peptides

Estrogen receptor: AB
Nuclear receptor coactivator 2: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Estrogen receptor

Nuclear receptor coactivator 2

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