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SMTL ID : 5tlv.1

Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with 4,4'-(thiophene-2,3-diyl)bis(3-fluorophenol)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.32 Å

Oligo State

hetero-2-2-mer

Ligands

2 x 7ES: 4,4'-(thiene-2,3-diyl)bis(3-fluorophenol)(Non-covalent)

7ES.1:	16 residues within 4Å: Chain A: M.46, L.49, T.50, A.53, E.56, L.87, L.90, M.91, L.94, R.97, F.107, M.124, I.127, L.131, L.228, L.243 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:A.53, A:L.87, A:L.90, A:L.94, A:F.107, A:L.131, A:L.228, A:L.228 Hydrogen bonds: A:T.50, A:E.56, A:R.97 Water bridges: A:L.94 pi-Stacking: A:F.107
7ES.2:	16 residues within 4Å: Chain B: M.46, L.49, T.50, A.53, E.56, L.90, M.91, L.94, R.97, F.107, M.124, I.127, L.131, L.228, L.239, L.243 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:A.53, B:L.90, B:L.94, B:F.107, B:L.131, B:L.228, B:L.228 Hydrogen bonds: B:T.50, B:E.56, B:R.97 Water bridges: B:R.97 pi-Stacking: B:F.107

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Nwachukwu, J.C. et al., Systems Structural Biology Analysis of Ligand Effects on ER alpha Predicts Cellular Response to Environmental Estrogens and Anti-hormone Therapies. Cell Chem Biol (2017)

Release Date

2017-01-18

Peptides

Estrogen receptor: AB
Nuclear receptor coactivator 2: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Estrogen receptor

Nuclear receptor coactivator 2

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