SMTL ID : 5tmo.1

Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with the Arene Core OBHS derivative, phenyl 4,4''-dihydroxy-[1,1':2',1''-terphenyl]-4'-sulfonate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.17 Å

Oligo State

hetero-2-2-mer

Ligands

2 x 7M1: phenyl 4,4''-dihydroxy-[1,1':2',1''-terphenyl]-4'-sulfonate(Non-covalent)

7M1.1: 20 residues within 4Å: Chain A: M.46, L.49, T.50, A.53, E.56, W.86, L.87, L.90, L.94, R.97, F.107, V.121, E.122, G.123, M.124, I.127, G.224, H.227, L.228, L.243 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.49, A:T.50, A:W.86, A:L.87, A:L.90, A:L.94, A:L.94, A:F.107, A:V.121, A:M.124, A:H.227, A:L.228 Hydrogen bonds: A:E.56, A:R.97 Water bridges: A:L.94 pi-Stacking: A:F.107 7M1.2: 17 residues within 4Å: Chain B: M.45, M.46, L.49, T.50, A.53, E.56, L.87, L.90, L.94, R.97, F.107, M.124, I.127, F.128, G.224, H.227, L.243 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:L.49, B:L.49, B:A.53, B:L.87, B:L.90, B:L.94, B:L.94, B:F.107, B:F.128 Hydrogen bonds: B:T.50, B:L.90, B:R.97 Water bridges: B:R.97 Salt bridges: B:H.227 pi-Stacking: B:F.107

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nwachukwu, J.C. et al., Systems Structural Biology Analysis of Ligand Effects on ER alpha Predicts Cellular Response to Environmental Estrogens and Anti-hormone Therapies. Cell Chem Biol (2017)

Release Date

2017-01-18

Peptides

Estrogen receptor: AB
Nuclear receptor coactivator 2: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Estrogen receptor

Nuclear receptor coactivator 2

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