SMTL ID : 5dkb.1

Crystal Structure of the ER-alpha Ligand-binding Domain in complex with a 3-methylphenylamino-substituted ethyl triaryl-ethylene derivative 4,4'-(2-{3-[(3-methylphenyl)amino]phenyl}but-1-ene-1,1-diyl)diphenol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-2-2-mer

Ligands

3 x 5C9: 4,4'-(2-{3-[(3-methylphenyl)amino]phenyl}but-1-ene-1,1-diyl)diphenol(Non-covalent)

5C9.1: 20 residues within 4Å: Chain A: M.46, L.49, T.50, A.53, E.56, L.87, L.90, L.94, R.97, F.107, E.122, G.123, M.124, L.131, G.224, H.227, L.228, M.231, L.243 Ligands: 5C9.2 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.49, A:A.53, A:L.87, A:L.90, A:L.94, A:F.107, A:M.124, A:L.131, A:H.227, A:L.228, A:L.228 Hydrogen bonds: A:L.90, A:R.97 Water bridges: A:R.97 5C9.2: 20 residues within 4Å: Chain A: M.46, L.49, T.50, A.53, E.56, L.87, L.90, L.94, R.97, F.107, V.121, E.122, M.124, L.131, G.224, H.227, L.228, M.231, L.243 Ligands: 5C9.1 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.49, A:A.53, A:L.87, A:L.90, A:L.94, A:F.107, A:V.121, A:M.124, A:L.131, A:H.227, A:L.228, A:L.228, A:L.228 Hydrogen bonds: A:L.90, A:R.97 Water bridges: A:R.97 5C9.3: 16 residues within 4Å: Chain B: M.46, L.49, T.50, A.53, E.56, L.90, R.97, F.107, E.122, M.124, L.131, G.224, H.227, L.228, M.231, L.243 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:L.49, B:A.53, B:L.90, B:F.107, B:M.124, B:L.131, B:H.227, B:L.228 Hydrogen bonds: B:L.90, B:R.97 Water bridges: B:R.97

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nwachukwu, J.C. et al., Predictive features of ligand-specific signaling through the estrogen receptor. Mol.Syst.Biol. (2016)

Release Date

2016-05-04

Peptides

Estrogen receptor: AB
Nuclear receptor coactivator 2: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Estrogen receptor

Nuclear receptor coactivator 2

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