SMTL ID : 5dks.1

Crystal Structure of the ER-alpha Ligand-binding Domain in complex with a 2-naphthylamino-substituted, ethyl, triaryl-ethylene derivative 4,4'-{2-[3-(naphthalen-1-ylamino)phenyl]but-1-ene-1,1-diyl}diphenol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-2-2-mer

Ligands

2 x 5C6: 4,4'-{2-[3-(naphthalen-1-ylamino)phenyl]but-1-ene-1,1-diyl}diphenol(Non-covalent)

5C6.1: 22 residues within 4Å: Chain A: M.45, M.46, L.49, T.50, L.52, A.53, E.56, L.87, L.90, L.94, R.97, F.107, G.118, V.121, M.124, I.127, F.128, L.131, G.224, L.228, L.239, L.243 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:M.45, A:L.49, A:T.50, A:L.52, A:A.53, A:L.87, A:L.90, A:L.94, A:F.107, A:V.121, A:M.124, A:M.124, A:I.127, A:F.128, A:L.131, A:L.228, A:L.228 Hydrogen bonds: A:E.56, A:R.97, A:R.97 Water bridges: A:L.94 5C6.2: 20 residues within 4Å: Chain B: M.45, M.46, L.49, T.50, A.53, E.56, W.86, L.87, L.90, L.94, R.97, F.107, M.124, I.127, F.128, L.131, G.224, H.227, L.228, L.243 18 PLIP interactions: 18 interactions with chain B Hydrophobic interactions: B:L.49, B:T.50, B:A.53, B:W.86, B:L.90, B:L.94, B:F.107, B:F.107, B:M.124, B:I.127, B:F.128, B:L.131, B:L.228, B:L.228 Hydrogen bonds: B:E.56, B:R.97, B:R.97, B:H.227

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nwachukwu, J.C. et al., Predictive features of ligand-specific signaling through the estrogen receptor. Mol.Syst.Biol. (2016)

Release Date

2016-05-04

Peptides

Estrogen receptor: AB
Nuclear receptor coactivator 2: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Estrogen receptor

Nuclear receptor coactivator 2

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