SMTL ID : 5drj.1

Crystal Structure of the ER-alpha Ligand-binding Domain in complex with a dichloro-substituted, 3-methyl 2,5-diarylthiophene-core ligand 4,4'-(3-methylthiene-2,5-diyl)bis(3-chlorophenol)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.07 Å

Oligo State

hetero-2-2-mer

Ligands

2 x 5EU: 4,4'-(3-methylthiene-2,5-diyl)bis(3-chlorophenol)(Non-covalent)

5EU.1: 16 residues within 4Å: Chain A: M.46, L.49, L.52, A.53, E.56, L.90, M.91, L.94, R.97, G.123, M.124, I.127, G.224, H.227, L.228, M.231 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.52, A:L.90, A:M.124, A:I.127, A:H.227, A:L.228 Hydrogen bonds: A:L.90, A:R.97 Water bridges: A:R.97 pi-Stacking: A:F.107 5EU.2: 13 residues within 4Å: Chain B: L.49, A.53, E.56, L.90, M.91, L.94, R.97, F.107, G.123, M.124, I.127, G.224, H.227 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:L.90, B:M.124, B:I.127, B:H.227 Hydrogen bonds: B:R.97, B:G.123 Water bridges: B:E.56, B:L.94 pi-Stacking: B:F.107

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nwachukwu, J.C. et al., Predictive features of ligand-specific signaling through the estrogen receptor. Mol.Syst.Biol. (2016)

Release Date

2016-05-04

Peptides

Estrogen receptor: AB
Nuclear receptor coactivator 2: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Estrogen receptor

Nuclear receptor coactivator 2

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