SMTL ID : 5du5.1

Crystal Structure of the ER-alpha Ligand-binding Domain in complex with a dichloro-substituted, 3,4-diarylthiophene dioxide core ligand

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.19 Å

Oligo State

hetero-2-2-mer

Ligands

2 x 5G2: 3,4-bis(2-chloro-4-hydroxyphenyl)-1H-1lambda~6~-thiophene-1,1-dione(Non-covalent)

5G2.1: 15 residues within 4Å: Chain A: L.49, T.50, L.52, A.53, E.56, L.87, L.90, M.91, L.94, F.107, M.124, I.127, L.131, L.228, L.243 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.49, A:A.53, A:L.228 Hydrogen bonds: A:E.56, A:E.56 pi-Stacking: A:F.107 5G2.2: 15 residues within 4Å: Chain B: M.46, L.49, T.50, L.52, A.53, E.56, L.87, L.90, M.91, F.107, I.127, F.128, L.131, L.228, L.243 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:L.49, B:L.228 Hydrogen bonds: B:E.56 pi-Stacking: B:F.107

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nwachukwu, J.C. et al., Predictive features of ligand-specific signaling through the estrogen receptor. Mol.Syst.Biol. (2016)

Release Date

2016-05-04

Peptides

Estrogen receptor: AB
Nuclear receptor coactivator 2: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Estrogen receptor

Nuclear receptor coactivator 2

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