SMTL ID : 5iz7.4 (3 other biounits)

Cryo-EM structure of thermally stable Zika virus strain H/PF/2013

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-3-3-mer

Ligands

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: M.151, N.154, T.156 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:N.154 NAG.2: 2 residues within 4Å: Chain B: M.151, N.154 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:N.154 NAG.3: 7 residues within 4Å: Chain D: H.148, S.149, G.150, V.153, N.154, G.157, H.158 2 PLIP interactions: 2 interactions with chain D Hydrophobic interactions: D:V.153 Hydrogen bonds: D:H.148

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kostyuchenko, V.A. et al., Structure of the thermally stable Zika virus. Nature (2016)

Release Date

2016-05-25

Peptides

structural protein E: ABD
structural protein M: CEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

D
B

C
D

E
E

F
F

structural protein E

structural protein M

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