- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
NAD.2: 30 residues within 4Å:- Chain A: I.705, S.706, P.707, W.708, N.709, F.710, I.714, K.732, P.733, A.734, D.764, G.765, G.768, A.769, F.782, T.783, G.784, S.785, V.788, L.791, I.792, E.812, T.813, G.814, C.846, E.942, F.944, F.1012, S.1018
- Ligands: MG.9
15 PLIP interactions:15 interactions with chain A- Hydrophobic interactions: A:P.707, A:F.710, A:I.714, A:T.783
- Hydrogen bonds: A:S.706, A:S.706, A:W.708, A:K.732, A:S.785, A:T.813, A:E.942
- Water bridges: A:E.735, A:E.736, A:T.786, A:T.813
NAD.11: 30 residues within 4Å:- Chain B: I.705, S.706, P.707, W.708, N.709, F.710, I.714, K.732, P.733, A.734, D.764, G.765, G.768, A.769, F.782, T.783, G.784, S.785, V.788, L.791, I.792, E.812, T.813, G.814, C.846, E.942, F.944, F.1012, S.1018
- Ligands: MG.18
15 PLIP interactions:15 interactions with chain B- Hydrophobic interactions: B:P.707, B:F.710, B:I.714, B:T.783
- Hydrogen bonds: B:S.706, B:S.706, B:W.708, B:K.732, B:S.785, B:T.813, B:E.942
- Water bridges: B:E.735, B:E.736, B:T.786, B:T.813
- 2 x TFB: TETRAHYDROFURAN-2-CARBOXYLIC ACID(Non-covalent)
TFB.3: 9 residues within 4Å:- Chain A: K.267, D.308, A.374, L.451, Y.475, Y.487, R.490, R.491
- Ligands: FAD.1
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:L.451, A:Y.475
- Hydrogen bonds: A:K.267
- Water bridges: A:Y.375
- Salt bridges: A:K.267, A:R.490, A:R.491
TFB.12: 9 residues within 4Å:- Chain B: K.267, D.308, A.374, L.451, Y.475, Y.487, R.490, R.491
- Ligands: FAD.10
8 PLIP interactions:8 interactions with chain B- Hydrophobic interactions: B:L.451, B:Y.475
- Hydrogen bonds: B:K.267
- Water bridges: B:Y.375, B:Y.375
- Salt bridges: B:K.267, B:R.490, B:R.491
- 2 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)
- 2 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)
PG4.5: 9 residues within 4Å:- Chain A: A.672, E.673, E.676, F.710, A.713, I.714, R.845, I.1003, A.1005
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:R.845, A:R.845
PG4.14: 9 residues within 4Å:- Chain B: A.672, E.673, E.676, F.710, A.713, I.714, R.845, I.1003, A.1005
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:R.845, B:R.845
- 4 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)
1PE.6: 6 residues within 4Å:- Chain A: A.572, A.573, M.574, K.575, V.603, V.604
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:K.575
1PE.7: 6 residues within 4Å:- Chain A: K.381, L.385, R.1000, E.1092, N.1221, A.1223
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:K.381, A:E.1092, A:E.1092, A:N.1221, A:N.1221
1PE.15: 6 residues within 4Å:- Chain B: A.572, A.573, M.574, K.575, V.603, V.604
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:K.575
1PE.16: 6 residues within 4Å:- Chain B: K.381, L.385, R.1000, E.1092, N.1221, A.1223
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:K.381, B:E.1092, B:N.1221, B:N.1221
- 2 x SO4: SULFATE ION(Non-functional Binders)
SO4.8: 8 residues within 4Å:- Chain A: S.96, Q.98, E.99, A.169, R.172
- Chain B: R.690, P.1041, Q.1042
9 PLIP interactions:3 interactions with chain B, 6 interactions with chain A- Hydrogen bonds: B:Q.1042, A:S.96, A:S.96
- Water bridges: B:R.690, A:S.97, A:R.172, A:R.172
- Salt bridges: B:R.690, A:R.172
SO4.17: 8 residues within 4Å:- Chain A: R.690, P.1041, Q.1042
- Chain B: S.96, Q.98, E.99, A.169, R.172
9 PLIP interactions:3 interactions with chain A, 6 interactions with chain B- Hydrogen bonds: A:Q.1042, B:S.96, B:S.96
- Water bridges: A:R.690, B:S.97, B:R.172, B:R.172
- Salt bridges: A:R.690, B:R.172
- 2 x MG: MAGNESIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Luo, M. et al., Structures of Proline Utilization A (PutA) Reveal the Fold and Functions of the Aldehyde Dehydrogenase Superfamily Domain of Unknown Function. J.Biol.Chem. (2016)
- Release Date
- 2016-10-05
- Peptides
- Bifunctional protein PutA: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 2 x TFB: TETRAHYDROFURAN-2-CARBOXYLIC ACID(Non-covalent)
- 2 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)
- 2 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)
- 4 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)
- 2 x SO4: SULFATE ION(Non-functional Binders)
- 2 x MG: MAGNESIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Luo, M. et al., Structures of Proline Utilization A (PutA) Reveal the Fold and Functions of the Aldehyde Dehydrogenase Superfamily Domain of Unknown Function. J.Biol.Chem. (2016)
- Release Date
- 2016-10-05
- Peptides
- Bifunctional protein PutA: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A