SMTL ID : 5krk.1

Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with 4,4'-((5-bromo-2,3-dihydro-1H-inden-1-ylidene)methylene)diphenol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.39 Å

Oligo State

hetero-2-2-mer

Ligands

2 x 6WQ: 4-[(5-bromanyl-2,3-dihydroinden-1-ylidene)-(4-hydroxyphenyl)methyl]phenol(Non-covalent)

6WQ.1: 16 residues within 4Å: Chain A: M.46, L.49, T.50, A.53, E.56, L.90, R.97, F.107, E.122, G.123, M.124, I.127, H.227, L.228, L.239, L.243 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.49, A:A.53, A:A.53, A:L.90, A:F.107, A:I.127, A:L.228, A:L.228 Hydrogen bonds: A:E.56, A:R.97 Water bridges: A:L.94 pi-Stacking: A:F.107 Halogen bonds: A:E.122 6WQ.2: 17 residues within 4Å: Chain B: M.46, L.49, T.50, A.53, E.56, L.87, L.90, L.94, R.97, F.107, M.124, I.127, L.131, G.224, H.227, L.228, L.243 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:L.49, B:A.53, B:L.87, B:L.90, B:L.94, B:F.107, B:I.127, B:L.131, B:L.228, B:L.228 Hydrogen bonds: B:E.56, B:R.97 Water bridges: B:L.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nwachukwu, J.C. et al., Systems Structural Biology Analysis of Ligand Effects on ER alpha Predicts Cellular Response to Environmental Estrogens and Anti-hormone Therapies. Cell Chem Biol (2017)

Release Date

2017-01-18

Peptides

Estrogen receptor: AB
NCOA2: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Estrogen receptor

NCOA2

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