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SMTL ID : 5nqk.1

human 199.16 TCR in complex with Melan-A/MART-1 (26-35) peptide and HLA-A2

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.25 Å

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1:

2 residues within 4Å:

Chain E: V.154, P.175

1 PLIP interactions:

1 interactions with chain E

Hydrogen bonds: E:V.154

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Exertier, C. et al., human 199.16 TCR in complex with Melan-A/MART-1 (26-35) peptide and HLA-A2. To Be Published

Release Date

2018-05-30

Peptides

HLA class I histocompatibility antigen, A-2 alpha chain: A
Beta-2-microglobulin: B
Melanoma antigen recognized by T-cells 1: C
T-cell receptor alpha variable 12-2,T-cell receptor alpha joining 45,T-cell receptor alpha chain C region: D
T-cell receptor beta variable 19,TRB protein: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

C
P

D
A

E
B

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

HLA class I histocompatibility antigen, A-2 alpha chain

Beta-2-microglobulin

Melanoma antigen recognized by T-cells 1

T-cell receptor alpha variable 12-2,T-cell receptor alpha joining 45,T-cell receptor alpha chain C region

T-cell receptor beta variable 19,TRB protein

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1i1y.1 | 1i1y.2 | 1i4f.1 | 1i7r.1 | 1i7r.2 | 1i7t.1 | 1i7t.2 | 1i7u.1 | 1i7u.2 | 1im3.1 | 1im3.2 | 1im3.3 | 1im3.4 | 1im9.1 | 1jf1.1 | 1jgd.1 | 1jge.1 | 1jht.1 | 1jnj.1 | 1k5n.1 | 1kpr.1 | 1kpr.2 | 1kpr.3 | 1kpr.4 | 1ktl.1 | 1ktl.2 | 1ktl.3 | 1lds.1 | 1lp9.1 | 1lp9.2 | 1mhe.1 | 1of2.1 | 1oga.1 | 1ogt.1 | 1q94.1 | 1q94.2 | 1qew.1 | 1qr1.1 | 1qr1.2 | 1qrn.1 | 1qse.1 | 1qsf.1 | 1qvo.1 | 1qvo.2 | 1s9w.1 | 1s9x.1 | 1s9y.1 | 1sys.1 | 1syv.1 | 1tmc.1 | 1tvb.1 | 1tvb.2 | 1tvh.1 | 1tvh.2 | 1uqs.1 | 1uxs.1 | 1uxw.1 | 1w0v.1 | 1w0w.1 | 1w72.1 | 1w72.2 | 1ydp.1 | 1ydp.2 | 1zt4.1 | 1zt4.2 | 1zt4.3 | 2a83.1 | 2av1.1 | 2av1.2 | 2av7.1 | 2av7.2 | 2bck.1 | 2bck.2 | 2bck.3 | 2bnq.1 | 2bnr.1 | 2bsr.1 | 2bss.1 | 2bst.1 | 2bvo.1 | 2bvp.1 | 2bvq.1 | 2c7u.1 | 2c7u.2 | 2clr.1 | 2clr.2 | 2d31.1 | 2d31.2 | 2d4f.1 | 2dyp.1 | 2esv.1 | 2f74.1 | 2f74.2 | 2git.1 | 2git.2 | 2gj6.1 | 2gt9.1 | 2gt9.2 | 2gtw.1 | 2gtw.2 | 2gtz.1 | 2gtz.2 | 2guo.1 | 2guo.2 | 2j8u.1 | 2j8u.2 | 2jcc.1 | 2jcc.2 | 2uwe.1 | 2uwe.2 | 2v2w.1 | 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