SMTL ID : 8shi.2 (1 other biounit)

Valpha3S1 Vbeta13S1 HLA C 0602 VRSRRCLRL

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x VAL- ARG- SER- ARG- ARG- ABA- LEU- ARG- LEU: VAL-ARG-SER-ARG-ARG-ABA-LEU-ARG-LEU(Non-covalent)

VAL-ARG-SER-ARG-ARG-ABA-LEU-ARG-LEU.1: 34 residues within 4Å: Chain A: M.6, Y.8, D.10, S.25, Y.60, R.63, E.64, K.67, Y.68, R.70, Q.71, A.74, N.78, K.81, Y.85, W.98, Y.100, S.117, T.144, K.147, W.148, E.153, Q.156, W.157, Y.160, W.168, Y.172 Chain C: R.51 Chain D: E.29, V.49, Y.94, E.96, E.98, D.99 33 PLIP interactions: 28 interactions with chain A, 5 interactions with chain D Hydrophobic interactions: A:Y.8, A:Y.60, A:K.67, A:Y.68, A:R.70, A:A.74, A:W.98, A:W.98, A:W.157, A:W.168, A:W.168 Hydrogen bonds: A:S.25, A:S.25, A:E.64, A:Q.71, A:Q.71, A:N.78, A:N.78, A:Y.100, A:Y.100, A:Q.156, A:Q.156, A:Y.172, A:Y.172, D:V.49, D:Y.94 Salt bridges: A:D.10, A:K.81, A:K.147, A:E.153, D:E.96, D:D.99 pi-Cation interactions: D:Y.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Anand, S. et al., Complimentary electrostatics dominate T-cell receptor binding to a psoriasis-associated peptide antigen presented by human leukocyte antigen C∗06:02. J.Biol.Chem. (2023)

Release Date

2023-06-28

Peptides

MHC class I antigen (Fragment): A
Beta-2-microglobulin: B
T cell receptor alpha: C
T cell receptor beta: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

C
I

D
J

MHC class I antigen (Fragment)

Beta-2-microglobulin

T cell receptor alpha

T cell receptor beta

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