SMTL ID : 8es8.1

CryoEM structure of PN45545 TCR-CD3 in complex with HLA-A2 MAGEA4 (230-239)

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-2-1-2-1-1-1-1-1-1-mer
Ligands
1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
5 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x Y01: CHOLESTEROL HEMISUCCINATE(Non-covalent)
5 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Saotome, K. et al., Structural analysis of cancer-relevant TCR-CD3 and peptide-MHC complexes by cryoEM. Nat Commun (2023)
Release Date
2023-05-03
Peptides
T-cell surface glycoprotein CD3 zeta chain: AB
T-cell surface glycoprotein CD3 delta chain: C
T-cell surface glycoprotein CD3 epsilon chain: DF
T-cell surface glycoprotein CD3 gamma chain: E
PN45545 TCR alpha chain: G
PN45545 TCR beta chain: H
MHC class I antigen: I
Beta-2-microglobulin: J
Melanoma-associated antigen 4: K
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
Z
B
Y
C
D
D
F
F
E
E
G
G
A
H
B
I
N
J
M
K
P
Membrane
We predict this structure to be a membrane protein.

T-cell surface glycoprotein CD3 zeta chain

T-cell surface glycoprotein CD3 delta chain

T-cell surface glycoprotein CD3 epsilon chain

T-cell surface glycoprotein CD3 gamma chain

PN45545 TCR alpha chain

PN45545 TCR beta chain

MHC class I antigen

Beta-2-microglobulin

Melanoma-associated antigen 4

Related Entries With Identical Sequence

1a9b.1 | 1a9b.2 | 1a9e.1 | 1b0g.1 | 1b0g.2 | 1b0r.1 | 1bd2.1 | 1cg9.1 | 1duy.1 | 1duy.2 | 1duz.1 | 1duz.2 | 1eey.1 | 1eey.2 | 1eez.1 | 1eez.2 | 1efx.1 | 1gzp.1 | 1gzq.1 | 1hhg.1 | 1hhg.2 | 1hhh.1 | 1hhi.1 | 1hhi.2 | 1hhj.1 | 1hhj.2 | 1hhk.1 | 1hhk.2 | 1i1f.1 | 1i1f.2  more...