SMTL ID : 5v4n.2 (1 other biounit)

Structure of HLA-DR1 with bound alpha3(135-145) peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.41 Å

Oligo State

hetero-1-1-mer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: V.116, N.118, E.166, W.168 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.116, A:E.166 NAG.2: 2 residues within 4Å: Chain B: N.45, E.48 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.48

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ooi, J.D. et al., Dominant protection from HLA-linked autoimmunity by antigen-specific regulatory T cells. Nature (2017)

Release Date

2017-05-03

Peptides

HLA-DRA1: A
alpha3(135-145)-HLA-DRB1*01:01: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
F

HLA-DRA1

alpha3(135-145)-HLA-DRB1*01:01

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