SMTL ID : 5zya.1

SF3b spliceosomal complex bound to E7107

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY 3.95 Å
Oligo State
hetero-1-1-1-1-mer
Ligands
1 x 9B0: [(2~{S},3~{S},4~{E},6~{S},7~{R},10~{R})-3,7-dimethyl-2-[(2~{E},4~{E},6~{R})-6-methyl-6-oxidanyl-7-[(2~{R},3~{R})-3-[(2~{R},3~{S})-3-oxidanylpentan-2-yl]oxiran-2-yl]hepta-2,4-dien-2-yl]-7,10-bis(oxidanyl)-12-oxidanylidene-1-oxacyclododec-4-en-6-yl] 4-cycloheptylpiperazine-1-carboxylate(Non-covalent)
3 x ZN: ZINC ION(Non-covalent)
1 x K: POTASSIUM ION(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Finci, L.I. et al., The cryo-EM structure of the SF3b spliceosome complex bound to a splicing modulator reveals a pre-mRNA substrate competitive mechanism of action. Genes Dev. (2018)
Release Date
2018-06-20
Peptides
Splicing factor 3B subunit 5: A
Splicing factor 3B subunit 1: B
PHD finger-like domain-containing protein 5A: C
Splicing factor 3B subunit 3: D
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
B
B
C
C
D
D
A

Splicing factor 3B subunit 5

Splicing factor 3B subunit 1

PHD finger-like domain-containing protein 5A

Splicing factor 3B subunit 3

Related Entries With Identical Sequence

5ife.1 | 5z56.1 | 5z57.1 | 5z58.1 | 6ah0.1 | 6ahd.51 | 6ahd.55 | 6ff4.1 | 6ff7.1 | 6qx9.27 | 6qx9.65