SMTL ID : 8rm5.1

Cryo-EM structure of the cross-exon pre-B+5'ssLNG+ATPyS complex

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-3-1-3-3-3-3-3-3-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
None
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH
Citation
Zhang, Z. et al., Structural insights into the cross-exon to cross-intron spliceosome switch. Nature (2024)
Release Date
2024-05-22
Peptides
U6 snRNA-associated Sm-like protein LSm6: A
U6 snRNA-associated Sm-like protein LSm7: B
U6 snRNA-associated Sm-like protein LSm2: C
U6 snRNA-associated Sm-like protein LSm3: D
U6 snRNA-associated Sm-like protein LSm8: E
U6 snRNA-associated Sm-like protein LSm4: F
U6 snRNA-associated Sm-like protein LSm5: G
U5 small nuclear ribonucleoprotein 40 kDa protein: H
Splicing factor 3B subunit 4: I
Splicing factor 3A subunit 2: K
Splicing factor 3A subunit 3: L
Splicing factor 3B subunit 2: M
Splicing factor 3B subunit 5: N
Splicing factor 3B subunit 3: P
PHD finger-like domain-containing protein 5A: Q
Splicing factor 3B subunit 1: R
Splicing factor 3B subunit 6: S
Small nuclear ribonucleoprotein Sm D2: T4d
U2 small nuclear ribonucleoprotein B'': U
Small nuclear ribonucleoprotein F: V5e
Small nuclear ribonucleoprotein-associated proteins B and B': W2g
Small nuclear ribonucleoprotein Sm D3: X8f
Small nuclear ribonucleoprotein G: Y7h
Small nuclear ribonucleoprotein E: Z6c
Small nuclear ribonucleoprotein Sm D1: 03b
U2 small nuclear ribonucleoprotein A': 1
U5 small nuclear ribonucleoprotein 200 kDa helicase: 9
Peptidyl-prolyl cis-trans isomerase H: a
Ubiquitin carboxyl-terminal hydrolase 39: i
Probable ATP-dependent RNA helicase DDX23: k
U4/U6 small nuclear ribonucleoprotein Prp3: l
U4/U6 small nuclear ribonucleoprotein Prp31: m
U4/U6 small nuclear ribonucleoprotein Prp4: n
Pre-mRNA-processing factor 6: o
Pre-mRNA-processing-splicing factor 8: p
U4/U6.U5 tri-snRNP-associated protein 1: q
116 kDa U5 small nuclear ribonucleoprotein component: r
NHP2-like protein 1, N-terminally processed: s
Thioredoxin-like protein 4A: t
Splicing factor 3A subunit 1: v
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
66
B
67
C
62
D
63
E
68
F
64
G
65
H
E
I
B4
K
8
L
9
M
B2
N
B5
P
B3
Q
BP
R
B1
S
B6
T
22
4
52
d
42
U
2B
V
2f
5
5f
e
4f
W
2b
2
5b
g
4b
X
23
8
53
f
43
Y
2g
7
5g
h
4g
Z
2e
6
5e
c
4e
0
21
3
51
b
41
1
2A
9
B
a
W
i
U
k
G
l
J
m
L
n
F
o
N
p
A
q
S
r
C
s
M
t
D
v
7

U6 snRNA-associated Sm-like protein LSm6

U6 snRNA-associated Sm-like protein LSm7

U6 snRNA-associated Sm-like protein LSm2

U6 snRNA-associated Sm-like protein LSm3

U6 snRNA-associated Sm-like protein LSm8

U6 snRNA-associated Sm-like protein LSm4

U6 snRNA-associated Sm-like protein LSm5

U5 small nuclear ribonucleoprotein 40 kDa protein

Splicing factor 3B subunit 4

Splicing factor 3A subunit 2

Splicing factor 3A subunit 3

Splicing factor 3B subunit 2

Splicing factor 3B subunit 5

Splicing factor 3B subunit 3

PHD finger-like domain-containing protein 5A

Splicing factor 3B subunit 1

Splicing factor 3B subunit 6

Small nuclear ribonucleoprotein Sm D2

U2 small nuclear ribonucleoprotein B''

Small nuclear ribonucleoprotein F

Toggle Identical (Ve)

Small nuclear ribonucleoprotein-associated proteins B and B'

Small nuclear ribonucleoprotein Sm D3

Small nuclear ribonucleoprotein G

Toggle Identical (7h)

Small nuclear ribonucleoprotein E

Small nuclear ribonucleoprotein Sm D1

U2 small nuclear ribonucleoprotein A'

U5 small nuclear ribonucleoprotein 200 kDa helicase

Peptidyl-prolyl cis-trans isomerase H

Ubiquitin carboxyl-terminal hydrolase 39

Probable ATP-dependent RNA helicase DDX23

U4/U6 small nuclear ribonucleoprotein Prp3

U4/U6 small nuclear ribonucleoprotein Prp31

U4/U6 small nuclear ribonucleoprotein Prp4

Pre-mRNA-processing factor 6

Pre-mRNA-processing-splicing factor 8

U4/U6.U5 tri-snRNP-associated protein 1

116 kDa U5 small nuclear ribonucleoprotein component

NHP2-like protein 1, N-terminally processed

Thioredoxin-like protein 4A

Splicing factor 3A subunit 1

Related Entries With Identical Sequence

1b34.1 | 1e7k.1 | 1e7k.2 | 1mzw.1 | 1qgv.1 | 1qoi.1 | 1syx.1 | 1syx.2 | 1syx.3 | 2f9d.1 | 2f9d.2 | 4f7u.1 | 4f7u.2 | 4pjo.1 | 4pjo.2 | 4pjo.3 | 4pjo.4 | 4v98.1 | 4v98.2 | 4v98.3 | 4v98.4 | 4v98.5 | 4v98.6 | 4v98.7 | 4v98.8 | 4v98.9 | 4v98.10 | 4v98.11 | 4v98.12 | 4v98.13  more...