SMTL ID : 6ff7.1

human Bact spliceosome core structure

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-2-1-1-1-4-1-1-1-1-1-1-2-2-2-2-2-2-2-1-1-1-1-1-mer
Ligands
11 x ZN: ZINC ION(Non-covalent)
5 x MG: MAGNESIUM ION(Non-functional Binders)
1 x IHP: INOSITOL HEXAKISPHOSPHATE(Non-covalent)
1 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)
2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Haselbach, D. et al., Structure and Conformational Dynamics of the Human Spliceosomal BactComplex. Cell (2018)
Release Date
2019-03-13
Peptides
RNA-binding motif protein, X-linked 2: A
BUD13 homolog: C
Splicing factor 3A subunit 2: F
Splicing factor 3B subunit 2: G
Pre-mRNA-processing-splicing factor 8: H
116 kDa U5 small nuclear ribonucleoprotein component: I
SNW domain-containing protein 1: J
Pleiotropic regulator 1: K
Pre-mRNA-processing factor 17: L
Cell division cycle 5-like protein: M
Crooked neck-like protein 1: N
Pre-mRNA-splicing factor RBM22: O
Protein BUD31 homolog: P
Spliceosome-associated protein CWC15 homolog: Q
Serine/arginine repetitive matrix protein 2: R
Peptidyl-prolyl cis-trans isomerase-like 1: S
Serine/arginine repetitive matrix protein 1: T
Peptidyl-prolyl cis-trans isomerase CWC27 homolog: V
RING finger protein 113A: W
Splicing factor 3B subunit 1: X
Splicing factor 3B subunit 3: Y
Splicing factor 3B subunit 5: Z
PHD finger-like domain-containing protein 5A: 0
Splicing factor 3B subunit 6: 1y
Smad nuclear-interacting protein 1: 2
Splicing factor 3A subunit 3: 3
U5 small nuclear ribonucleoprotein 40 kDa protein: 4
Pre-mRNA-processing factor 19: 5678
Pre-mRNA-splicing factor SPF27: 9
Pre-mRNA-splicing factor SYF1: a
Pre-mRNA-splicing factor CWC22 homolog: b
Intron-binding protein aquarius: c
U2 small nuclear ribonucleoprotein A': d
U2 small nuclear ribonucleoprotein B'': e
Small nuclear ribonucleoprotein Sm D2: fm
Small nuclear ribonucleoprotein F: gn
Small nuclear ribonucleoprotein E: ho
Small nuclear ribonucleoprotein G: ip
Small nuclear ribonucleoprotein Sm D3: jq
Small nuclear ribonucleoprotein-associated proteins B and B': kr
Small nuclear ribonucleoprotein Sm D1: ls
Peptidyl-prolyl cis-trans isomerase E: t
Splicing factor 3A subunit 1: u
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16: v
U5 small nuclear ribonucleoprotein 200 kDa helicase: w
Pre-mRNA-splicing factor ISY1 homolog: x
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
1
C
3
F
7
G
8
H
A
I
B
J
C
K
D
L
E
M
L
N
O
O
P
P
Q
Q
R
R
S
S
V
T
Y
V
s
W
t
X
u
Y
v
Z
x
0
y
1
z
y
N
2
0
3
9
4
F
5
G
6
H
7
I
8
J
9
K
a
M
b
T
c
U
d
W
e
X
f
a
m
h
g
b
n
i
h
c
o
j
i
d
p
k
j
e
q
l
k
f
r
m
l
g
s
n
t
o
u
p
v
q
w
r
x
w

RNA-binding motif protein, X-linked 2

BUD13 homolog

Splicing factor 3A subunit 2

Splicing factor 3B subunit 2

Pre-mRNA-processing-splicing factor 8

116 kDa U5 small nuclear ribonucleoprotein component

SNW domain-containing protein 1

Pleiotropic regulator 1

Pre-mRNA-processing factor 17

Cell division cycle 5-like protein

Crooked neck-like protein 1

Pre-mRNA-splicing factor RBM22

Protein BUD31 homolog

Spliceosome-associated protein CWC15 homolog

Serine/arginine repetitive matrix protein 2

Peptidyl-prolyl cis-trans isomerase-like 1

Serine/arginine repetitive matrix protein 1

Peptidyl-prolyl cis-trans isomerase CWC27 homolog

RING finger protein 113A

Splicing factor 3B subunit 1

Splicing factor 3B subunit 3

Splicing factor 3B subunit 5

PHD finger-like domain-containing protein 5A

Splicing factor 3B subunit 6

Toggle Identical (1y)

Smad nuclear-interacting protein 1

Splicing factor 3A subunit 3

U5 small nuclear ribonucleoprotein 40 kDa protein

Pre-mRNA-processing factor 19

Toggle Identical (68)

Pre-mRNA-splicing factor SPF27

Pre-mRNA-splicing factor SYF1

Pre-mRNA-splicing factor CWC22 homolog

Intron-binding protein aquarius

U2 small nuclear ribonucleoprotein A'

U2 small nuclear ribonucleoprotein B''

Small nuclear ribonucleoprotein Sm D2

Small nuclear ribonucleoprotein F

Small nuclear ribonucleoprotein E

Small nuclear ribonucleoprotein G

Small nuclear ribonucleoprotein Sm D3

Small nuclear ribonucleoprotein-associated proteins B and B'

Small nuclear ribonucleoprotein Sm D1

Peptidyl-prolyl cis-trans isomerase E

Splicing factor 3A subunit 1

Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16

U5 small nuclear ribonucleoprotein 200 kDa helicase

Pre-mRNA-splicing factor ISY1 homolog

Related Entries With Identical Sequence

1b34.1 | 2f9d.1 | 2f9d.2 | 2x7k.1 | 4f7u.1 | 4f7u.2 | 4pjo.1 | 4pjo.2 | 4pjo.3 | 4pjo.4 | 4v98.1 | 4v98.2 | 4v98.3 | 4v98.4 | 4v98.5 | 4v98.6 | 4v98.7 | 4v98.8 | 4v98.9 | 4v98.10 | 4v98.11 | 4v98.12 | 4v98.13 | 4v98.14 | 4v98.15 | 4v98.16 | 4v98.17 | 4v98.18 | 4v98.19 | 4v98.20  more...