SMTL ID : 6cr8.1

Ternary complex crystal structure of DNA polymerase Beta with a dideoxy terminated primer with CHCL (R & S isomers), beta, gamma dATP analogue

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.05 Å
Oligo State
monomer
Ligands
1 x DG- DT- DC- DG- DG: Downstream Primer Strand(Non-covalent)
1 x VA4: 5'-O-[(R)-{[(R)-[(R)-chloro(phosphono)methyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]-2'-deoxyadenosine(Non-covalent)
1 x MG: MAGNESIUM ION(Non-covalent)
3 x NA: SODIUM ION(Non-functional Binders)
2 x CL: CHLORIDE ION(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Batra, V.K. et al., Mapping Functional Substrate-Enzyme Interactions in the pol beta Active Site through Chemical Biology: Structural Responses to Acidity Modification of Incoming dNTPs. Biochemistry (2018)
Release Date
2018-07-04
Peptides
DNA polymerase beta: C
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
C
A

DNA polymerase beta

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