SMTL ID : 6ezx.1

CATHEPSIN L IN COMPLEX WITH (3S,14E)-19-chloro-N-(1-cyanocyclopropyl)-5-oxo-17-oxa-4-azatricyclo[16.2.2.06,11]docosa-1(21),6,8,10,14,18(22),19-heptaene-3-carboxamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.34 Å

Oligo State

homo-dimer

Ligands

2 x C7Q: (3~{S},14~{E})-19-chloranyl-~{N}-[1-(iminomethyl)cyclopropyl]-5-oxidanylidene-17-oxa-4-azatricyclo[16.2.2.0^{6,11}]docosa-1(21),6,8,10,14,18(22),19-heptaene-3-carboxamide(Covalent)

C7Q.1: 14 residues within 4Å: Chain A: Q.19, G.23, C.25, W.26, G.67, G.68, L.69, M.70, A.135, M.161, D.162, H.163, G.164, A.214 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.69, A:L.69 Hydrogen bonds: A:Q.19, A:C.25, A:G.68, A:G.68, A:D.162 C7Q.2: 15 residues within 4Å: Chain B: Q.19, G.23, C.25, W.26, E.63, G.67, G.68, L.69, M.70, A.135, M.161, D.162, H.163, G.164, A.214 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:E.63, B:L.69, B:L.69, B:A.135 Hydrogen bonds: B:Q.19, B:C.25, B:G.68, B:G.68, B:D.162

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Giroud, M. et al., Repurposing a Library of Human Cathepsin L Ligands: Identification of Macrocyclic Lactams as Potent Rhodesain and Trypanosoma brucei Inhibitors. J. Med. Chem. (2018)

Release Date

2018-04-11

Peptides

Cathepsin L1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Cathepsin L1

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