SMTL ID : 7bzo.1 (3 other biounits)

Cryo-EM structure of mature Coxsackievirus A10 at pH 5.5

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x SPH: SPHINGOSINE(Non-covalent)

SPH.1: 15 residues within 4Å: Chain A: I.110, D.111, I.112, F.134, Y.152, Y.154, V.178, V.191, Y.200, W.202, N.227, M.229, F.232, M.252 Chain C: I.24 16 PLIP interactions: 14 interactions with chain A, 2 interactions with chain C Hydrophobic interactions: A:I.110, A:I.112, A:F.134, A:Y.152, A:Y.154, A:Y.154, A:Y.154, A:V.178, A:V.191, A:V.191, A:M.229, A:F.232, C:I.24, C:I.24 Hydrogen bonds: A:I.110, A:N.227

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cui, Y. et al., Molecular basis of Coxsackievirus A10 entry using the two-in-one attachment and uncoating receptor KRM1. Proc.Natl.Acad.Sci.USA (2020)

Release Date

2020-07-22

Peptides

Capsid protein VP1: A
Capsid protein VP2: B
Capsid protein VP3: C
Capsid protein VP4: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Capsid protein VP1

Capsid protein VP2

Capsid protein VP3

Capsid protein VP4

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