SMTL ID : 7hlq.1

PanDDA analysis group deposition -- Crystal Structure of TRIM21 in complex with Z32327641

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.33 Å

Oligo State

monomer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 4 residues within 4Å: Chain A: M.33, F.171, N.172, Y.173 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.172 EDO.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

1 x JMM: [4-(cyclopropanecarbonyl)piperazin-1-yl](furan-2-yl)methanone(Non-covalent)

JMM.2: 8 residues within 4Å: Chain A: P.95, E.96, W.100, F.154, S.155, E.156, C.157, V.158 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:E.96, A:F.154 Hydrogen bonds: A:V.158

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 3 residues within 4Å: Chain A: F.91, S.92, N.97 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.92, A:N.97 Water bridges: A:S.92

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, Y. et al., PanDDA analysis group deposition. To Be Published

Release Date

2024-11-27

Peptides

E3 ubiquitin-protein ligase TRIM21: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

E3 ubiquitin-protein ligase TRIM21

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