SMTL ID : 7hnu.1

PanDDA analysis group deposition -- Crystal Structure of TRIM21 in complex with Z1614545742

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.15 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: W.21, M.33, F.171, N.172, Y.173 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.172, A:N.172

1 x GQJ: methyl (2~{S},4~{R})-1-(furan-2-ylcarbonyl)-4-oxidanyl-pyrrolidine-2-carboxylate(Non-covalent)

GQJ.2: 8 residues within 4Å: Chain A: V.70, T.71, Q.72, K.73, E.74, P.125, C.126, G.176 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.72, A:K.73 Water bridges: A:D.107, A:D.107

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 3 residues within 4Å: Chain A: F.91, S.92, N.97 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.92, A:N.97 Water bridges: A:S.92

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, Y. et al., PanDDA analysis group deposition. To Be Published

Release Date

2024-11-27

Peptides

E3 ubiquitin-protein ligase TRIM21: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

E3 ubiquitin-protein ligase TRIM21

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