SMTL ID : 7odv.1 (1 other biounit)

Plant peptide hormone receptor complex H1LS1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.31 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 10 residues within 4Å: Chain A: H.125, D.127, V.149, S.151, M.173, N.175, V.198, W.200, D.222 Chain C: S.7 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:V.198 NAG-NAG-BMA.4: 4 residues within 4Å: Chain A: D.20, A.62, N.86, S.87 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:D.20

4 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.2: 3 residues within 4Å: Chain A: Y.394, N.418, N.442 No protein-ligand interaction detected (PLIP) NAG-NAG.3: 3 residues within 4Å: Chain A: G.142, K.143, N.167 No protein-ligand interaction detected (PLIP) NAG-NAG.5: 4 residues within 4Å: Chain B: L.107, N.131, N.155, N.178 No protein-ligand interaction detected (PLIP) NAG-NAG.6: 5 residues within 4Å: Chain B: M.140, T.143, N.144, N.165 Ligands: NAG.16 No protein-ligand interaction detected (PLIP)

8 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.7: 3 residues within 4Å: Chain A: L.557, N.558, N.579 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.579 NAG.8: 6 residues within 4Å: Chain A: L.227, D.229, N.251, M.275 Chain C: R.12 Ligands: NA.13 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.229, A:N.251 Water bridges: A:D.229 NAG.9: 4 residues within 4Å: Chain A: T.388, H.410, N.412, N.434 No protein-ligand interaction detected (PLIP) NAG.10: 4 residues within 4Å: Chain A: S.58, N.60, Y.81, N.82 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.58, A:N.60, A:N.60, A:Y.81, A:N.82 NAG.11: 1 residues within 4Å: Chain A: N.192 1 PLIP interactions: 1 interactions with chain A Water bridges: A:N.192 NAG.14: 3 residues within 4Å: Chain B: S.92, N.93, N.96 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:S.92 NAG.15: 1 residues within 4Å: Chain B: N.85 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.85 NAG.16: 3 residues within 4Å: Chain B: N.144 Ligands: NAG-NAG.6, NAG-NAG.6 No protein-ligand interaction detected (PLIP)

2 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)

MG.12: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.17: 4 residues within 4Å: Chain B: C.39, T.40, W.41, V.44 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:C.39, B:V.44, H2O.3, H2O.4, H2O.6

1 x NA: SODIUM ION(Non-functional Binders)

NA.13: 4 residues within 4Å: Chain A: N.228, D.229, N.251 Ligands: NAG.8 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.229 Water bridges: A:D.229

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Roman, A.O. et al., HSL1 and BAM1/2 impact epidermal cell development by sensing distinct signaling peptides. Nat Commun (2022)

Release Date

2022-02-16

Peptides

Receptor-like protein kinase HSL1: A
Somatic embryogenesis receptor kinase 1: B
Protein IDA: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

B
BBB

C
CCC

Receptor-like protein kinase HSL1

Somatic embryogenesis receptor kinase 1

Protein IDA

Related Entries With Identical Sequence