SMTL ID : 7ogo.2 (1 other biounit)

Plant peptide hormone receptor H1I1S1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.38 Å

Oligo State

hetero-1-1-1-mer

Ligands

5 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 7 residues within 4Å: Chain A: S.537, L.557, N.558, S.560, Y.561, N.579, S.580 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.561 NAG-NAG.2: 3 residues within 4Å: Chain A: G.142, K.143, N.167 No protein-ligand interaction detected (PLIP) NAG-NAG.3: 3 residues within 4Å: Chain A: Y.394, N.418, N.442 No protein-ligand interaction detected (PLIP) NAG-NAG.7: 5 residues within 4Å: Chain B: M.140, T.143, N.144, N.165, G.166 No protein-ligand interaction detected (PLIP) NAG-NAG.8: 4 residues within 4Å: Chain B: L.107, N.131, N.155, N.178 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-FUC.4: 5 residues within 4Å: Chain A: D.20, A.62, N.86, S.87, L.108 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.20 Hydrophobic interactions: A:L.108

1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.5: 10 residues within 4Å: Chain A: H.125, D.127, V.149, S.151, M.173, N.175, V.198, W.200, D.222 Chain C: S.7 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:V.198

1 x NAG- NAG- BMA- MAN- MAN: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-MAN.6: 5 residues within 4Å: Chain A: S.58, N.60, Y.81, N.82 Chain C: Y.1 No protein-ligand interaction detected (PLIP)

6 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.9: 4 residues within 4Å: Chain A: T.110, N.132, S.134, L.156 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.110, A:S.134, A:S.134 Water bridges: A:N.132, A:N.132 NAG.10: 4 residues within 4Å: Chain A: L.227, N.251, M.275 Chain C: R.12 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.251 NAG.11: 3 residues within 4Å: Chain A: H.410, N.412, N.434 No protein-ligand interaction detected (PLIP) NAG.12: 1 residues within 4Å: Chain A: N.192 No protein-ligand interaction detected (PLIP) NAG.13: 1 residues within 4Å: Chain B: N.85 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.85 NAG.14: 3 residues within 4Å: Chain B: S.92, N.93, N.96 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:S.92

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Roman, A.O. et al., HSL1 and BAM1/2 impact epidermal cell development by sensing distinct signaling peptides. Nat Commun (2022)

Release Date

2022-02-16

Peptides

Receptor-like protein kinase HSL1: A
Somatic embryogenesis receptor kinase 1: B
Protein IDA-LIKE 1: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
DDD

B
EEE

C
FFF

Receptor-like protein kinase HSL1

Somatic embryogenesis receptor kinase 1

Protein IDA-LIKE 1

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