SMTL ID : 8t4z.1

T-cell receptor and lipid complex structure

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.69 Å
Oligo State
hetero-1-1-1-1-mer
Ligands
2 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x Y73: N-[(2R,3R,4E)-1,3-dihydroxyoctadec-4-en-2-yl]tetracosanamide(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Cheng, T.Y. et al., Lipidomic scanning of self-lipids identifies headless antigens for natural killer T cells. Proc.Natl.Acad.Sci.USA (2024)
Release Date
2024-08-07
Peptides
Antigen-presenting glycoprotein CD1d1: A
Beta-2-microglobulin: B
T cell receptor alpha variable 11, Human nkt tcr alpha chain chimera: C
Beta-chain, T cell receptor beta chain MC.7.G5 chimera: D
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D

Antigen-presenting glycoprotein CD1d1

Beta-2-microglobulin

T cell receptor alpha variable 11, Human nkt tcr alpha chain chimera

Beta-chain, T cell receptor beta chain MC.7.G5 chimera

Related Entries With Identical Sequence

1p4l.1 | 1u58.1 | 1z5l.1 | 1z5l.2 | 1z5l.3 | 2akr.1 | 2akr.2 | 2akr.3 | 2akr.4 | 2fik.1 | 2gaz.1 | 2q7y.1 | 2q7y.2 | 3arb.1 | 3ard.1 | 3are.1 | 3arf.1 | 3arg.1 | 3au1.1 | 3c8k.1 | 3g08.1 | 3gml.1 | 3gmm.1 | 3gmn.1 | 3gmo.1 | 3gmp.1 | 3gmq.1 | 3gmr.1 | 3he6.1 | 3he7.1  more...