SMTL ID : 1a8g.1

HIV-1 PROTEASE IN COMPLEX WITH SDZ283-910

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

1 x 2Z4: benzyl [(1R)-1-({(1S,2S,3S)-1-benzyl-2-hydroxy-4-({(1S)-1-[(2-hydroxy-4-methoxybenzyl)carbamoyl]-2-methylpropyl}amino)-3-[(4-methoxybenzyl)amino]-4-oxobutyl}carbamoyl)-2,2-dimethylpropyl]carbamate(Non-covalent)

2Z4.1: 28 residues within 4Å: Chain A: R.8, D.25, G.27, A.28, D.29, D.30, K.45, M.46, I.47, G.48, G.49, I.50, P.81, V.82, I.84 Chain B: D.25, G.27, A.28, D.29, D.30, M.46, I.47, G.48, G.49, I.50, P.81, V.82, I.84 24 PLIP interactions: 13 interactions with chain B, 11 interactions with chain A Hydrophobic interactions: B:A.28, B:I.47, B:I.50, B:I.50, B:P.81, B:V.82, B:I.84, A:D.30, A:I.47, A:I.47, A:P.81, A:V.82, A:I.84 Hydrogen bonds: B:G.27, B:D.29, B:D.29, B:D.29, B:G.48, A:G.27, A:G.27, A:D.29, A:G.48 Water bridges: B:I.50, A:I.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ringhofer, S. et al., X-ray structure and conformational dynamics of the HIV-1 protease in complex with the inhibitor SDZ283-910: agreement of time-resolved spectroscopy and molecular dynamics simulations. J.Mol.Biol. (1999)

Release Date

1998-07-15

Peptides

HIV-1 PROTEASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HIV-1 PROTEASE

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