SMTL ID : 4phv.1

X-RAY CRYSTAL STRUCTURE OF THE HIV PROTEASE COMPLEX WITH L-700,417, AN INHIBITOR WITH PSEUDO C2 SYMMETRY

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x VAC: N,N-BIS(2-HYDROXY-1-INDANYL)-2,6- DIPHENYLMETHYL-4-HYDROXY-1,7-HEPTANDIAMIDE(Non-covalent)

VAC.1: 31 residues within 4Å: Chain A: R.8, L.23, D.25, G.27, A.28, D.29, D.30, V.32, I.47, G.48, G.49, I.50, P.81, V.82, I.84 Chain B: R.8, L.23, D.25, G.27, A.28, D.29, D.30, V.32, I.47, G.48, G.49, I.50, P.81, V.82, I.84 Ligands: VAC.2 27 PLIP interactions: 14 interactions with chain A, 13 interactions with chain B Hydrophobic interactions: A:L.23, A:A.28, A:D.30, A:V.32, A:I.47, A:I.50, A:P.81, A:V.82, A:I.84, B:L.23, B:A.28, B:D.30, B:V.32, B:I.47, B:P.81, B:V.82, B:I.84 Hydrogen bonds: A:R.8, A:G.27, A:D.29, A:D.29, A:I.50, B:D.25, B:G.27, B:G.27, B:D.29, B:I.50 VAC.2: 31 residues within 4Å: Chain A: R.8, L.23, D.25, G.27, A.28, D.29, D.30, V.32, I.47, G.48, G.49, I.50, P.81, V.82, I.84 Chain B: R.8, L.23, D.25, G.27, A.28, D.29, D.30, V.32, I.47, G.48, G.49, I.50, P.81, V.82, I.84 Ligands: VAC.1 26 PLIP interactions: 14 interactions with chain A, 12 interactions with chain B Hydrophobic interactions: A:L.23, A:A.28, A:D.30, A:V.32, A:I.47, A:I.50, A:P.81, A:V.82, A:I.84, B:L.23, B:A.28, B:V.32, B:I.47, B:I.50, B:P.81, B:V.82, B:I.84 Hydrogen bonds: A:D.25, A:G.27, A:G.27, A:D.29, A:I.50, B:G.27, B:D.29, B:D.29, B:I.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bone, R. et al., X-Ray Crystal Structure of the HIV Protease Complex with L-700,417, an Inhibitor with Pseudo C2 Symmetry. J.Am.Chem.Soc. (1991)

Release Date

1993-10-31

Peptides

HIV-1 PROTEASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HIV-1 PROTEASE

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