- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 4 x MN: MANGANESE (II) ION(Non-covalent)
- 5 x K: POTASSIUM ION(Non-covalent)
K.2: 6 residues within 4Å:- Chain A: E.215, N.236, D.238, A.239, I.242, S.247
5 PLIP interactions:5 interactions with chain A- Metal complexes: A:E.215, A:D.238, A:A.239, A:I.242, A:S.247
K.3: 6 residues within 4Å:- Chain A: A.126, E.127, E.299, M.300, N.301
- Ligands: MN.1
5 PLIP interactions:3 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:E.127, A:E.299, A:M.300, H2O.5, H2O.5
K.6: 6 residues within 4Å:- Chain A: E.761, H.781, E.783, Q.784, V.787, S.792
5 PLIP interactions:5 interactions with chain A- Metal complexes: A:E.761, A:H.781, A:Q.784, A:V.787, A:S.792
K.10: 3 residues within 4Å:- Chain A: T.143, A.144, R.145
4 PLIP interactions:3 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:T.143, A:T.143, A:A.144, H2O.2
K.17: 2 residues within 4Å:- Chain B: H.16, D.112
4 PLIP interactions:2 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:H.16, B:D.112, H2O.8, H2O.27
- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.7: 4 residues within 4Å:- Chain A: Q.93, T.173, M.174
- Ligands: NET.15
Ligand excluded by PLIPCL.8: 5 residues within 4Å:- Chain A: A.370, N.371, F.900, P.901, G.902
Ligand excluded by PLIPCL.9: 4 residues within 4Å:- Chain A: W.213, N.289, N.292, R.294
Ligand excluded by PLIPCL.16: 5 residues within 4Å:- Chain A: E.549
- Chain B: F.15, H.16, I.113, D.114
Ligand excluded by PLIP- 2 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)
ANP.12: 26 residues within 4Å:- Chain A: R.129, I.167, R.169, T.173, M.174, G.175, G.176, D.207, E.208, S.209, L.210, I.211, E.215, M.240, G.241, I.242, H.243, T.244, Q.285, I.298, E.299, N.301, R.303, R.306, T.376
- Ligands: MN.1
19 PLIP interactions:19 interactions with chain A- Hydrogen bonds: A:R.129, A:G.175, A:G.176, A:E.208, A:L.210, A:E.215, A:G.241, A:H.243, A:T.244, A:Q.285, A:E.299, A:R.303, A:R.306, A:R.306
- Water bridges: A:T.173, A:N.301, A:R.303
- Salt bridges: A:R.129, A:R.169
ANP.13: 27 residues within 4Å:- Chain A: R.675, P.690, V.713, R.715, V.719, L.720, G.721, G.722, M.725, D.753, H.754, F.755, L.756, E.761, A.785, G.786, V.787, H.788, S.789, Q.829, E.841, N.843, R.845, R.848, P.909
- Ligands: MN.4, MN.5
17 PLIP interactions:17 interactions with chain A- Hydrogen bonds: A:R.675, A:R.675, A:R.715, A:G.721, A:G.722, A:R.723, A:D.753, A:L.756, A:E.761, A:G.786, A:S.789, A:Q.829, A:R.845, A:R.848, A:R.848
- Salt bridges: A:R.675, A:R.715
- 1 x ORN: L-ornithine(Non-covalent)
- 1 x NET: TETRAETHYLAMMONIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Thoden, J.B. et al., Carbamoyl phosphate synthetase: closure of the B-domain as a result of nucleotide binding. Biochemistry (1999)
- Release Date
- 1999-04-20
- Peptides
- CARBAMOYL-PHOSPHATE SYNTHASE: A
CARBAMOYL-PHOSPHATE SYNTHASE: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 4 x MN: MANGANESE (II) ION(Non-covalent)
- 5 x K: POTASSIUM ION(Non-covalent)
- 4 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)
- 1 x ORN: L-ornithine(Non-covalent)
- 1 x NET: TETRAETHYLAMMONIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Thoden, J.B. et al., Carbamoyl phosphate synthetase: closure of the B-domain as a result of nucleotide binding. Biochemistry (1999)
- Release Date
- 1999-04-20
- Peptides
- CARBAMOYL-PHOSPHATE SYNTHASE: A
CARBAMOYL-PHOSPHATE SYNTHASE: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D