SMTL ID : 1nv5.1 (1 other biounit)

Fructose-1,6-Bisphosphatase Complex with Magnesium, Fructose-6-Phosphate, Phosphate, EDTA and Thallium (5 mM)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x F6P: 6-O-phosphono-beta-D-fructofuranose(Non-covalent)

F6P.1: 16 residues within 4Å: Chain A: D.121, G.122, N.212, Y.215, Y.244, G.246, S.247, M.248, Y.264, K.274, L.275, E.280 Ligands: MG.2, PO4.5, TL.6, TL.11 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:D.121, A:G.122, A:N.212, A:Y.215, A:Y.244, A:Y.244, A:M.248, A:Y.264, A:K.274, A:E.280 Water bridges: A:S.123, A:S.124, A:S.124, A:Y.215, A:K.274, A:K.274 Salt bridges: A:K.274

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 7 residues within 4Å: Chain A: D.118, D.121, E.280 Ligands: F6P.1, PO4.5, TL.6, TL.7 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.118, A:D.121, A:E.280 MG.3: 9 residues within 4Å: Chain A: D.74, E.97, E.98, D.118, L.120 Ligands: PO4.5, TL.7, TL.8, TL.9 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.97, A:D.118, A:L.120

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.4: 7 residues within 4Å: Chain A: G.26, T.27, G.28, E.29, M.30, K.112, Y.113 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:T.27, A:T.27, A:G.28, A:E.29, A:M.30, A:Y.113 Water bridges: A:T.31 Salt bridges: A:K.112 PO4.5: 16 residues within 4Å: Chain A: D.68, E.97, D.118, L.120, D.121, G.122, S.123, E.280 Ligands: F6P.1, MG.2, MG.3, TL.6, TL.7, TL.8, TL.9, TL.10 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:L.120, A:G.122, A:S.123 Water bridges: A:S.124

6 x TL: THALLIUM (I) ION(Covalent)(Non-covalent)

TL.6: 8 residues within 4Å: Chain A: D.118, D.121, G.122, E.280 Ligands: F6P.1, MG.2, PO4.5, TL.7 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.118, A:D.121, A:E.280 TL.7: 9 residues within 4Å: Chain A: E.97, D.118, L.120, D.121 Ligands: MG.2, MG.3, PO4.5, TL.6, TL.9 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.97, A:D.118, A:L.120 TL.8: 7 residues within 4Å: Chain A: N.64, D.68, D.74, E.97, E.98 Ligands: MG.3, PO4.5 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.97, A:E.98 TL.9: 6 residues within 4Å: Chain A: D.74, L.120, S.123 Ligands: MG.3, PO4.5, TL.7 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.74, A:L.120 TL.10: 5 residues within 4Å: Chain A: D.68, E.97, R.276 Ligands: PO4.5, TL.11 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.97 TL.11: 6 residues within 4Å: Chain A: K.274, L.275, R.276, E.280 Ligands: F6P.1, TL.10 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.280

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Choe, J.Y. et al., Interaction of Tl+ with product complexes of fructose-1,6-bisphosphatase. J.BIOL.CHEM. (2003)

Release Date

2003-07-08

Peptides

Fructose-1,6-bisphosphatase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fructose-1,6-bisphosphatase

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