- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.90 Å
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 1 x U- C- G- U- U: ANTICODON STEM-LOOP OF TRANSFER RNA WITH ANTICODON ACGA(Non-functional Binders)
- 1 x PAR: PAROMOMYCIN(Non-functional Binders)
- 192 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
- 26 x K: POTASSIUM ION(Non-functional Binders)(Non-covalent)
K.195: 4 residues within 4Å:- Chain A: G.289, A.299, U.300, G.301
Ligand excluded by PLIPK.196: 3 residues within 4Å:- Chain A: U.128, U.225, G.226
Ligand excluded by PLIPK.197: 1 residues within 4Å:- Chain A: U.841
Ligand excluded by PLIPK.198: 2 residues within 4Å:- Chain A: G.561, U.797
Ligand excluded by PLIPK.199: 2 residues within 4Å:- Chain A: G.872, G.873
Ligand excluded by PLIPK.200: 2 residues within 4Å:- Chain A: C.287, G.301
Ligand excluded by PLIPK.201: 2 residues within 4Å:- Chain A: G.560, G.561
Ligand excluded by PLIPK.202: 3 residues within 4Å:- Chain A: U.292, G.293
- Ligands: MG.128
Ligand excluded by PLIPK.203: 4 residues within 4Å:- Chain A: G.253, G.254, G.262
- Ligands: MG.118
Ligand excluded by PLIPK.204: 4 residues within 4Å:- Chain A: C.912, A.913, C.914, G.1325
Ligand excluded by PLIPK.205: 3 residues within 4Å:- Chain A: G.402, A.480, A.481
Ligand excluded by PLIPK.206: 6 residues within 4Å:- Chain A: U.496, C.497, U.518, A.519, G.522
- Ligands: MG.66
Ligand excluded by PLIPK.207: 2 residues within 4Å:- Chain A: G.198, U.199
Ligand excluded by PLIPK.208: 2 residues within 4Å:- Chain A: G.541, G.542
Ligand excluded by PLIPK.209: 2 residues within 4Å:- Chain A: G.672, G.684
Ligand excluded by PLIPK.210: 2 residues within 4Å:- Chain A: G.243, G.274
Ligand excluded by PLIPK.211: 2 residues within 4Å:- Chain A: A.1314, A.1315
Ligand excluded by PLIPK.212: 3 residues within 4Å:- Chain A: U.123, G.227, G.228
Ligand excluded by PLIPK.213: 1 residues within 4Å:- Chain A: G.163
Ligand excluded by PLIPK.214: 2 residues within 4Å:- Chain A: G.475, G.476
Ligand excluded by PLIPK.215: 3 residues within 4Å:- Chain E: N.65, M.136, R.140
Ligand excluded by PLIPK.216: 2 residues within 4Å:- Chain A: G.222, G.223
Ligand excluded by PLIPK.217: 3 residues within 4Å:- Chain A: C.840, U.841
- Chain E: E.83
Ligand excluded by PLIPK.218: 4 residues within 4Å:- Chain A: G.499, U.500, G.501, U.515
Ligand excluded by PLIPK.219: 1 residues within 4Å:- Chain A: G.708
Ligand excluded by PLIPK.220: 1 residues within 4Å:- Chain A: G.376
Ligand excluded by PLIP- 2 x ZN: ZINC ION(Non-covalent)
ZN.221: 5 residues within 4Å:- Chain D: C.9, C.12, L.19, C.26, C.31
3 PLIP interactions:3 interactions with chain D- Metal complexes: D:C.9, D:C.26, D:C.31
ZN.222: 5 residues within 4Å:- Chain N: C.24, C.27, R.29, C.40, C.43
4 PLIP interactions:4 interactions with chain N- Metal complexes: N:C.24, N:C.27, N:C.40, N:C.43
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Dunham, C.M. et al., Structures of Trnas with an Expanded Anticodon Loop in the Decoding Center of the 30S Ribosomal Subunit. RNA (2007)
- Release Date
- 2007-05-08
- Peptides
- RIBOSOMAL PROTEIN S2: B
RIBOSOMAL PROTEIN S3: C
RIBOSOMAL PROTEIN S4: D
RIBOSOMAL PROTEIN S5: E
RIBOSOMAL PROTEIN S6: F
RIBOSOMAL PROTEIN S7: G
RIBOSOMAL PROTEIN S8: H
RIBOSOMAL PROTEIN S9: I
RIBOSOMAL PROTEIN S10: J
RIBOSOMAL PROTEIN S11: K
RIBOSOMAL PROTEIN S12: L
RIBOSOMAL PROTEIN S13: M
RIBOSOMAL PROTEIN S14: N
RIBOSOMAL PROTEIN S15: O
RIBOSOMAL PROTEIN S16: P
RIBOSOMAL PROTEIN S17: Q
RIBOSOMAL PROTEIN S18: R
RIBOSOMAL PROTEIN S19: S
RIBOSOMAL PROTEIN S20: T
RIBOSOMAL PROTEIN THX: U - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:B
BC
CD
DE
EF
FG
GH
HI
IJ
JK
KL
LM
MN
NO
OP
PQ
QR
RS
ST
TU
U
SMTL ID : 2uxc.1
Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA UCGU in the context of the Thermus thermophilus 30S subunit.
RIBOSOMAL PROTEIN S2
RIBOSOMAL PROTEIN S3
RIBOSOMAL PROTEIN S4
RIBOSOMAL PROTEIN S5
RIBOSOMAL PROTEIN S6
RIBOSOMAL PROTEIN S7
RIBOSOMAL PROTEIN S8
RIBOSOMAL PROTEIN S9
RIBOSOMAL PROTEIN S10
RIBOSOMAL PROTEIN S11
RIBOSOMAL PROTEIN S12
RIBOSOMAL PROTEIN S13
RIBOSOMAL PROTEIN S14
RIBOSOMAL PROTEIN S15
RIBOSOMAL PROTEIN S16
RIBOSOMAL PROTEIN S17
RIBOSOMAL PROTEIN S18
RIBOSOMAL PROTEIN S19
RIBOSOMAL PROTEIN S20
RIBOSOMAL PROTEIN THX
Related Entries With Identical Sequence
1emw.1 | 1fjg.1 | 1fka.1 | 1hnw.1 | 1hnx.1 | 1hnz.1 | 1hr0.1 | 1i94.1 | 1ibk.1 | 1ibl.1 | 1ibm.1 | 1j5e.1 | 1n32.1 | 1n33.1 | 1n34.1 | 1n36.1 | 1ris.1 | 1vvj.1 | 1vvj.2 | 1vy4.1 | 1vy4.2 | 1vy5.1 | 1vy5.2 | 1vy6.1 | 1vy6.2 | 1vy7.1 | 1vy7.2 | 1xmo.1 | 1xmq.1 | 1xnq.1 more...less...1xnr.1 | 2e5l.1 | 2f4v.1 | 2hhh.1 | 2kjv.1 | 2om7.1 | 2uu9.1 | 2uua.1 | 2uub.1 | 2uuc.1 | 2uxb.1 | 2uxd.1 | 2vqe.1 | 2vqf.1 | 2zm6.1 | 3a1p.1 | 3a1p.2 | 3oto.1 | 3t1h.1 | 3t1y.1 | 4aqy.1 | 4b3m.1 | 4b3r.1 | 4b3s.1 | 4b3t.1 | 4dr1.1 | 4dr2.1 | 4dr3.1 | 4dr4.1 | 4dr5.1 | 4dr6.1 | 4dr7.1 | 4duy.1 | 4duz.1 | 4dv0.1 | 4dv1.1 | 4dv2.1 | 4dv3.1 | 4dv4.1 | 4dv5.1 | 4dv6.1 | 4dv7.1 | 4gkj.1 | 4gkk.1 | 4ji0.1 | 4ji1.1 | 4ji2.1 | 4ji3.1 | 4ji4.1 | 4ji5.1 | 4ji6.1 | 4ji7.1 | 4ji8.1 | 4jv5.1 | 4jya.1 | 4k0k.1 | 4khp.1 | 4kvb.1 | 4l47.1 | 4l47.2 | 4l71.1 | 4l71.2 | 4lel.1 | 4lel.2 | 4lf4.1 | 4lf5.1 | 4lf6.1 | 4lf7.1 | 4lf8.1 | 4lf9.1 | 4lfa.1 | 4lfb.1 | 4lfc.1 | 4lfz.1 | 4lfz.2 | 4lnt.1 | 4lnt.2 | 4lsk.1 | 4lsk.2 | 4lt8.1 | 4lt8.2 | 4nxm.1 | 4nxn.1 | 4ox9.1 | 4p6f.1 | 4p6f.2 | 4p70.1 | 4p70.2 | 4tua.1 | 4tua.2 | 4tub.1 | 4tub.2 | 4tuc.1 | 4tuc.2 | 4tud.1 | 4tud.2 | 4tue.1 | 4tue.2 | 4v49.1 | 4v4a.1 | 4v4g.1 | 4v4g.2 | 4v4g.3 | 4v4g.4 | 4v4g.5 | 4v4i.1 | 4v4j.1 | 4v4p.1 | 4v4r.1 | 4v4s.1 | 4v4t.1 | 4v4x.1 | 4v4y.1 | 4v4z.1 | 4v51.1 | 4v51.2 | 4v5a.1 | 4v5a.2 | 4v5c.1 | 4v5c.2 | 4v5d.1 | 4v5d.2 | 4v5e.1 | 4v5e.2 | 4v5f.1 | 4v5f.2 | 4v5g.1 | 4v5g.2 | 4v5j.1 | 4v5j.2 | 4v5k.1 | 4v5k.2 | 4v5l.1 | 4v5m.1 | 4v5n.1 | 4v5p.1 | 4v5p.2 | 4v5q.1 | 4v5q.2 | 4v5r.1 | 4v5r.2 | 4v5s.1 | 4v5s.2 | 4v5z.4 | 4v5z.14 | 4v63.1 | 4v63.2 | 4v67.1 | 4v67.2 | 4v68.1 | 4v6a.1 | 4v6a.2 | 4v6f.1 | 4v6f.2 | 4v6g.1 | 4v6g.2 | 4v7j.1 | 4v7j.2 | 4v7k.1 | 4v7k.2 | 4v7l.1 | 4v7l.2 | 4v7m.1 | 4v7m.2 | 4v7p.1 | 4v7p.2 | 4v7w.1 | 4v7w.2 | 4v7x.1 | 4v7x.2 | 4v7y.1 | 4v7y.2 | 4v7z.1 | 4v7z.2 | 4v83.1 | 4v83.2 | 4v84.1 | 4v84.2 | 4v87.1 | 4v87.2 | 4v8a.1 | 4v8a.2 | 4v8b.1 | 4v8b.2 | 4v8c.1 | 4v8c.2 | 4v8d.1 | 4v8d.2 | 4v8e.1 | 4v8e.2 | 4v8f.1 | 4v8f.2 | 4v8g.1 | 4v8g.2 | 4v8h.1 | 4v8h.2 | 4v8i.1 | 4v8i.2 | 4v8j.1 | 4v8j.2 | 4v8n.1 | 4v8n.2 | 4v8o.1 | 4v8q.1 | 4v8u.1 | 4v8u.2 | 4v8x.1 | 4v8x.2 | 4v90.1 | 4v95.1 | 4v95.2 | 4v97.1 | 4v97.2 | 4v9a.1 | 4v9a.2 | 4v9b.1 | 4v9b.2 | 4v9h.1 | 4v9i.1 | 4v9i.2 | 4v9j.1 | 4v9j.2 | 4v9k.1 | 4v9k.2 | 4v9l.1 | 4v9l.2 | 4v9m.1 | 4v9m.2 | 4v9n.1 | 4v9n.2 | 4v9q.1 | 4v9q.2 | 4v9r.1 | 4v9r.2 | 4v9s.1 | 4v9s.2 | 4w29.1 | 4w29.2 | 4w2e.1 | 4w2f.1 | 4w2f.2 | 4w2g.1 | 4w2g.2 | 4w2h.1 | 4w2h.2 | 4w2i.1 | 4w2i.2 | 4w4g.1 | 4w4g.2 | 4wpo.1 | 4wpo.2 | 4wq1.1 | 4wq1.2 | 4wqf.1 | 4wqf.2 | 4wqr.1 | 4wqr.2 | 4wqu.1 | 4wqu.2 | 4wqy.1 | 4wqy.2 | 4wr6.1 | 4wr6.2 | 4wra.1 | 4wra.2 | 4wro.1 | 4wro.2 | 4wsd.1 | 4wsd.2 | 4wsm.1 | 4wsm.2 | 4wt1.1 | 4wt1.2 | 4wt8.1 | 4wt8.2 | 4wu1.1 | 4wu1.2 | 4wzd.1 | 4wzd.2 | 4wzo.1 | 4wzo.2 | 4x62.1 | 4x64.1 | 4x65.1 | 4x66.1 | 4xej.1 | 4xej.2 | 4y4o.1 | 4y4o.2 | 4y4p.1 | 4y4p.2 | 4yhh.1 | 4ypb.1 | 4ypb.2 | 4yy3.1 | 4yzv.1 | 4yzv.2 | 4z3s.1 | 4z3s.2 | 4z8c.1 | 4z8c.2 | 4zsn.1 | 4zsn.2 | 5a9z.1 | 5aa0.1 | 5br8.1 | 5czp.1 | 5czp.2 | 5d8b.1 | 5d8b.2 | 5dfe.1 | 5dfe.2 | 5dox.1 | 5dox.2 | 5doy.1 | 5doy.2 | 5e7k.1 | 5e7k.2 | 5e81.1 | 5e81.2 | 5el4.1 | 5el4.2 | 5el5.1 | 5el5.2 | 5el6.1 | 5el6.2 | 5el7.1 | 5el7.2 | 5hau.1 | 5hau.2 | 5hcp.1 | 5hcp.2 | 5hcq.1 | 5hcq.2 | 5hcr.1 | 5hcr.2 | 5hd1.1 | 5hd1.2 | 5ib7.1 | 5ib7.2 | 5ib8.1 | 5ib8.2 | 5ibb.1 | 5ibb.2 | 5imq.1 | 5imr.1 | 5iwa.1 | 5j30.1 | 5j30.2 | 5j3c.1 | 5j3c.2 | 5j4b.1 | 5j4b.2 | 5j4c.1 | 5j4c.2 | 5j4d.1 | 5j4d.2 | 5j8b.1 | 5lmn.1 | 5lmo.1 | 5lmp.1 | 5lmq.1 | 5lmr.1 | 5lms.1 | 5lmt.1 | 5lmu.1 | 5lmv.1 | 5ndj.1 | 5ndj.2 | 5ndk.1 | 5ndk.2 | 5ot7.1 | 5v8i.1 | 5v8i.2 | 5vp2.1 | 5vp2.2 | 5vpo.1 | 5vpo.2 | 5vpp.1 | 5vpp.2 | 5w4k.1 | 5w4k.2 | 5wis.1 | 5wis.2 | 5wit.1 | 5wit.2 | 5wnp.1 | 5wnq.1 | 5wnr.1 | 5wns.1 | 5wnt.1 | 5wnu.1 | 5wnv.1 | 5zlu.1 | 6b4v.1 | 6b4v.2 | 6boh.1 | 6boh.2 | 6bok.1 | 6bok.2 | 6buw.1 | 6buw.2 | 6bz6.1 | 6bz6.2 | 6bz7.1 | 6bz7.2 | 6bz8.1 | 6bz8.2 | 6c5l.1 | 6c5l.2 | 6cae.1 | 6cae.2 | 6cao.1 | 6cap.1 | 6caq.1 | 6car.1 | 6cas.1 | 6cfj.1 | 6cfj.2 | 6cfk.1 | 6cfk.2 | 6cfl.1 | 6cfl.2 | 6dti.1 | 6gsj.1 | 6gsj.2 | 6gsk.1 | 6gsk.2 | 6gsl.1 | 6gsl.2 | 6gzq.1 | 6gzx.63 | 6gzx.65 | 6gzx.85 | 6gzx.87 | 6gzz.63 | 6gzz.65 | 6gzz.85 | 6gzz.87 | 6mkn.1 | 6mpf.1 | 6mpi.1 | 6n1d.1 | 6n1d.2 | 6n9e.1 | 6n9e.2 | 6n9f.1 | 6n9f.2 | 6nd5.1 | 6nd5.2 | 6nd6.1 | 6nd6.2 | 6ndk.1 | 6ndk.2 | 6nsh.1 | 6nsh.2 | 6nta.1 | 6nta.2 | 6nuo.1 | 6nuo.2 | 6nwy.1 | 6nwy.2 | 6ny6.1 | 6o3m.1 | 6o3m.2 | 6o97.1 | 6o97.2 | 6of1.1 | 6of1.2 | 6of6.1 | 6of6.2 | 6oj2.1 | 6oj2.2 | 6ope.1 | 6ope.2 | 6ord.1 | 6ord.2 | 6osi.1 | 6osi.2 | 6otr.1 | 6otr.2 | 6oxa.1 | 6oxa.2 | 6oxi.1 | 6oxi.2 | 6q95.1 | 6qnq.1 | 6qnq.2 | 6qnr.1 | 6qnr.2 | 6ucq.1 | 6ucq.2 | 6uo1.1 | 6uo1.2 | 6xhv.1 | 6xhv.2 | 6xhw.1 | 6xhw.2 | 6xhx.1 | 6xhx.2 | 6xhy.1 | 6xhy.2 | 6xqd.1 | 6xqd.2 | 6xqe.1 | 6xqe.2 | 7azo.1 | 7azo.2 | 7azs.1 | 7azs.2 | 7dug.1 | 7duh.1 | 7dui.1 | 7duj.1 | 7duk.1 | 7dul.1 | 7jql.1 | 7jql.2 | 7jqm.1 | 7jqm.2 | 7lh5.1 | 7lh5.2 | 7md7.1 | 7md7.2 | 7rq8.1 | 7rq8.2 | 7rq9.1 | 7rq9.2 | 7rqa.1 | 7rqa.2 | 7rqb.1 | 7rqb.2 | 7rqc.1 | 7rqc.2 | 7rqd.1 | 7rqd.2 | 7rqe.1 | 7rqe.2 | 7u2h.1 | 7u2h.2 | 7u2i.1 | 7u2i.2 | 7u2j.1 | 7u2j.2 | 7v2l.1 | 7v2m.1 | 7v2n.1 | 7v2o.1 | 7v2p.1 | 7v2q.1 | 8cvj.1 | 8cvj.2 | 8cvk.1 | 8cvk.2 | 8cvl.1 | 8cvl.2 | 8ekb.1 | 8ekb.2 | 8ev6.1 | 8ev6.2 | 8ev7.1 | 8ev7.2 | 8fc1.1 | 8fc1.2 | 8fc2.1 | 8fc2.2 | 8fc3.1 | 8fc3.2 | 8fc4.1 | 8fc4.2 | 8fc5.1 | 8fc5.2 | 8fc6.1 | 8fc6.2 | 8fom.1 | 8fom.2 | 8fon.1 | 8fon.2 | 8g29.1 | 8g29.2 | 8g2a.1 | 8g2a.2 | 8g2b.1 | 8g2b.2 | 8g2c.1 | 8g2c.2 | 8g2d.1 | 8g2d.2 | 8t8b.30 | 8t8b.31 | 8t8b.32 | 8t8b.33 | 8t8b.34 | 8t8b.35 | 8t8b.36 | 8t8b.38 | 8t8b.39 | 8t8b.41 | 8t8b.42 | 8t8b.43 | 8t8b.44 | 8t8b.46 | 8t8b.47 | 8t8b.49 | 8t8b.80 | 8t8b.81 | 8t8b.82 | 8t8b.83 | 8t8b.84 | 8t8b.85 | 8t8b.86 | 8t8b.88 | 8t8b.89 | 8t8b.91 | 8t8b.92 | 8t8b.93 | 8t8b.94 | 8t8b.96 | 8t8b.97 | 8t8b.99 | 8t8c.30 | 8t8c.31 | 8t8c.32 | 8t8c.33 | 8t8c.34 | 8t8c.35 | 8t8c.36 | 8t8c.38 | 8t8c.39 | 8t8c.41 | 8t8c.42 | 8t8c.43 | 8t8c.44 | 8t8c.46 | 8t8c.47 | 8t8c.49 | 8t8c.80 | 8t8c.81 | 8t8c.82 | 8t8c.83 | 8t8c.84 | 8t8c.85 | 8t8c.86 | 8t8c.88 | 8t8c.89 | 8t8c.91 | 8t8c.92 | 8t8c.93 | 8t8c.94 | 8t8c.96 | 8t8c.97 | 8t8c.99 | 8ud6.1 | 8ud6.2 | 8ud7.1 | 8ud7.2 | 8ud8.1 | 8ud8.2 | 8uvr.1 | 8uvr.2 | 8uvs.1 | 8uvs.2 | 8vtu.1 | 8vtu.2 | 8vtv.1 | 8vtv.2 | 8vtw.1 | 8vtw.2 | 8vtx.1 | 8vtx.2 | 8vty.1 | 8vty.2 | 9b00.1 | 9b00.2