- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.45 Å
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 1 x A- A- A- U- U- U: RNA (5'-D(*AP*AP*AP*UP*UP*U)-3')(Non-covalent)
- 6 x PAR: PAROMOMYCIN(Non-functional Binders)(Non-covalent)
- 280 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
MG.8: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.9: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.10: 2 residues within 4Å:- Chain A: G.634, A.737
No protein-ligand interaction detected (PLIP)MG.11: 2 residues within 4Å:- Chain A: C.733, G.734
No protein-ligand interaction detected (PLIP)MG.12: 3 residues within 4Å:- Chain A: G.833, U.849
- Ligands: MG.173
No protein-ligand interaction detected (PLIP)MG.13: 3 residues within 4Å:- Chain A: A.110, G.111, G.285
No protein-ligand interaction detected (PLIP)MG.14: 4 residues within 4Å:- Chain A: C.49, A.52, G.109
- Ligands: PAR.4
No protein-ligand interaction detected (PLIP)MG.15: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.16: 1 residues within 4Å:- Chain A: G.784
No protein-ligand interaction detected (PLIP)MG.17: 3 residues within 4Å:- Chain A: U.1484, G.1486, U.1500
No protein-ligand interaction detected (PLIP)MG.18: 5 residues within 4Å:- Chain A: A.1478, G.1482, G.1483, A.1485, G.1486
No protein-ligand interaction detected (PLIP)MG.19: 1 residues within 4Å:- Chain A: G.1504
No protein-ligand interaction detected (PLIP)MG.20: 2 residues within 4Å:- Chain A: C.604, A.605
No protein-ligand interaction detected (PLIP)MG.21: 3 residues within 4Å:- Chain A: A.113, G.282, U.283
No protein-ligand interaction detected (PLIP)MG.22: 1 residues within 4Å:- Chain A: A.915
No protein-ligand interaction detected (PLIP)MG.23: 4 residues within 4Å:- Chain A: G.22, A.547, G.551, A.557
No protein-ligand interaction detected (PLIP)MG.24: 4 residues within 4Å:- Chain A: A.547, C.548, U.549, G.551
No protein-ligand interaction detected (PLIP)MG.25: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.26: 2 residues within 4Å:- Chain A: U.545, G.863
No protein-ligand interaction detected (PLIP)MG.27: 1 residues within 4Å:- Chain A: A.752
No protein-ligand interaction detected (PLIP)MG.28: 2 residues within 4Å:- Chain A: G.406, A.427
No protein-ligand interaction detected (PLIP)MG.29: 3 residues within 4Å:- Chain A: A.750, C.796, U.797
No protein-ligand interaction detected (PLIP)MG.30: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.31: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.32: 1 residues within 4Å:- Chain A: G.894
No protein-ligand interaction detected (PLIP)MG.33: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.34: 3 residues within 4Å:- Chain A: C.399, A.531, G.532
No protein-ligand interaction detected (PLIP)MG.35: 1 residues within 4Å:- Chain A: G.39
No protein-ligand interaction detected (PLIP)MG.36: 5 residues within 4Å:- Chain A: G.12, U.13, G.22, G.23, C.24
No protein-ligand interaction detected (PLIP)MG.37: 3 residues within 4Å:- Chain A: G.302, C.303
- Ligands: MG.212
No protein-ligand interaction detected (PLIP)MG.38: 2 residues within 4Å:- Chain A: U.544, G.550
No protein-ligand interaction detected (PLIP)MG.39: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.40: 3 residues within 4Å:- Chain A: G.572, C.573, G.628
No protein-ligand interaction detected (PLIP)MG.41: 4 residues within 4Å:- Chain A: G.579, C.580, G.581, U.582
No protein-ligand interaction detected (PLIP)MG.42: 4 residues within 4Å:- Chain A: U.555, A.556, A.557, A.558
No protein-ligand interaction detected (PLIP)MG.43: 3 residues within 4Å:- Chain A: U.564, U.741
- Ligands: MG.216
No protein-ligand interaction detected (PLIP)MG.44: 3 residues within 4Å:- Chain A: C.287, G.301
- Ligands: K.270
No protein-ligand interaction detected (PLIP)MG.45: 1 residues within 4Å:- Chain A: A.567
No protein-ligand interaction detected (PLIP)MG.46: 3 residues within 4Å:- Chain A: G.561, C.562, C.801
No protein-ligand interaction detected (PLIP)MG.47: 1 residues within 4Å:- Chain A: G.881
No protein-ligand interaction detected (PLIP)MG.48: 2 residues within 4Å:- Chain A: G.590, G.615
No protein-ligand interaction detected (PLIP)MG.49: 1 residues within 4Å:- Chain A: G.831
No protein-ligand interaction detected (PLIP)MG.50: 2 residues within 4Å:- Chain A: C.276
- Chain Q: S.38
1 PLIP interactions:1 interactions with chain Q- Metal complexes: Q:S.38
MG.51: 7 residues within 4Å:- Chain A: C.115, G.118, U.119, G.120, C.231, G.232, C.233
No protein-ligand interaction detected (PLIP)MG.52: 2 residues within 4Å:- Chain A: G.715, C.1505
No protein-ligand interaction detected (PLIP)MG.53: 1 residues within 4Å:- Chain A: U.630
No protein-ligand interaction detected (PLIP)MG.54: 1 residues within 4Å:- Chain A: C.520
No protein-ligand interaction detected (PLIP)MG.55: 2 residues within 4Å:- Chain A: C.44, G.45
No protein-ligand interaction detected (PLIP)MG.56: 1 residues within 4Å:- Chain A: A.838
No protein-ligand interaction detected (PLIP)MG.57: 4 residues within 4Å:- Chain A: A.843, C.844, G.1060, G.1062
No protein-ligand interaction detected (PLIP)MG.58: 5 residues within 4Å:- Chain A: U.1056, G.1057, G.1065, U.1066, G.1067
No protein-ligand interaction detected (PLIP)MG.59: 2 residues within 4Å:- Chain A: U.15, G.16
No protein-ligand interaction detected (PLIP)MG.60: 5 residues within 4Å:- Chain A: U.1476, A.1477, A.1478, G.1482, G.1483
No protein-ligand interaction detected (PLIP)MG.61: 1 residues within 4Å:- Chain A: A.556
No protein-ligand interaction detected (PLIP)MG.62: 2 residues within 4Å:- Chain A: U.1078, G.1091
No protein-ligand interaction detected (PLIP)MG.63: 4 residues within 4Å:- Chain A: C.1054, U.1066, G.1067
- Chain E: R.23
No protein-ligand interaction detected (PLIP)MG.64: 3 residues within 4Å:- Chain A: C.1092, A.1093, C.1171
No protein-ligand interaction detected (PLIP)MG.65: 1 residues within 4Å:- Chain A: G.1062
No protein-ligand interaction detected (PLIP)MG.66: 2 residues within 4Å:- Chain A: G.872, G.873
No protein-ligand interaction detected (PLIP)MG.67: 6 residues within 4Å:- Chain A: G.563, U.564, A.743, G.744, G.745, C.746
No protein-ligand interaction detected (PLIP)MG.68: 1 residues within 4Å:- Chain A: G.107
No protein-ligand interaction detected (PLIP)MG.69: 1 residues within 4Å:- Chain A: C.348
No protein-ligand interaction detected (PLIP)MG.70: 2 residues within 4Å:- Chain A: G.65, A.95
No protein-ligand interaction detected (PLIP)MG.71: 1 residues within 4Å:- Chain A: G.387
No protein-ligand interaction detected (PLIP)MG.72: 1 residues within 4Å:- Chain A: U.383
No protein-ligand interaction detected (PLIP)MG.73: 2 residues within 4Å:- Chain A: C.488, G.489
No protein-ligand interaction detected (PLIP)MG.74: 4 residues within 4Å:- Chain A: G.490, C.491, C.492, A.493
No protein-ligand interaction detected (PLIP)MG.75: 2 residues within 4Å:- Chain A: G.864, G.865
No protein-ligand interaction detected (PLIP)MG.76: 4 residues within 4Å:- Chain A: U.500, G.501, A.516, A.517
No protein-ligand interaction detected (PLIP)MG.77: 1 residues within 4Å:- Chain A: G.876
No protein-ligand interaction detected (PLIP)MG.78: 3 residues within 4Å:- Chain A: A.174, C.201, A.202
No protein-ligand interaction detected (PLIP)MG.79: 1 residues within 4Å:- Chain A: A.867
No protein-ligand interaction detected (PLIP)MG.80: 2 residues within 4Å:- Chain A: U.177, G.178
No protein-ligand interaction detected (PLIP)MG.81: 1 residues within 4Å:- Chain A: A.761
No protein-ligand interaction detected (PLIP)MG.82: 2 residues within 4Å:- Chain A: C.685
- Ligands: MG.150
No protein-ligand interaction detected (PLIP)MG.83: 2 residues within 4Å:- Chain A: C.763, A.764
No protein-ligand interaction detected (PLIP)MG.84: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.85: 2 residues within 4Å:- Chain A: G.1439, G.1440
No protein-ligand interaction detected (PLIP)MG.86: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.87: 3 residues within 4Å:- Chain A: G.475, G.476
- Ligands: K.281
No protein-ligand interaction detected (PLIP)MG.88: 2 residues within 4Å:- Chain A: G.357, G.358
No protein-ligand interaction detected (PLIP)MG.89: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.90: 2 residues within 4Å:- Chain A: A.593
- Ligands: PAR.6
No protein-ligand interaction detected (PLIP)MG.91: 1 residues within 4Å:- Chain A: G.1442
No protein-ligand interaction detected (PLIP)MG.92: 2 residues within 4Å:- Chain A: G.105, G.106
No protein-ligand interaction detected (PLIP)MG.93: 1 residues within 4Å:- Chain A: G.320
No protein-ligand interaction detected (PLIP)MG.94: 3 residues within 4Å:- Chain A: C.169, C.170, A.204
No protein-ligand interaction detected (PLIP)MG.95: 6 residues within 4Å:- Chain A: A.294, G.295, G.542, A.543, U.544, G.550
No protein-ligand interaction detected (PLIP)MG.96: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.97: 5 residues within 4Å:- Chain A: A.1050, G.1051, G.1077, G.1370, C.1371
No protein-ligand interaction detected (PLIP)MG.98: 3 residues within 4Å:- Chain A: U.240, C.871, G.872
No protein-ligand interaction detected (PLIP)MG.99: 6 residues within 4Å:- Chain A: G.1036, C.1037, G.1179, G.1180, U.1181
- Ligands: K.289
No protein-ligand interaction detected (PLIP)MG.100: 3 residues within 4Å:- Chain A: C.1037, G.1179, G.1180
No protein-ligand interaction detected (PLIP)MG.101: 1 residues within 4Å:- Ligands: PAR.5
No protein-ligand interaction detected (PLIP)MG.102: 2 residues within 4Å:- Chain A: G.434, U.479
No protein-ligand interaction detected (PLIP)MG.103: 1 residues within 4Å:- Chain A: C.958
No protein-ligand interaction detected (PLIP)MG.104: 2 residues within 4Å:- Chain A: G.1475, U.1476
No protein-ligand interaction detected (PLIP)MG.105: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.106: 3 residues within 4Å:- Chain A: U.1519, U.1520
- Ligands: MG.234
No protein-ligand interaction detected (PLIP)MG.107: 3 residues within 4Å:- Chain A: U.1032, C.1185
- Chain N: A.1
No protein-ligand interaction detected (PLIP)MG.108: 1 residues within 4Å:- Chain A: G.1353
No protein-ligand interaction detected (PLIP)MG.109: 2 residues within 4Å:- Chain A: C.453, C.456
No protein-ligand interaction detected (PLIP)MG.110: 4 residues within 4Å:- Chain A: C.1285, G.1286, G.1287
- Chain U: D.4
No protein-ligand interaction detected (PLIP)MG.111: 1 residues within 4Å:- Chain A: G.1206
No protein-ligand interaction detected (PLIP)MG.112: 7 residues within 4Å:- Chain A: U.1488, G.1489, U.1490, A.1491, U.1500, G.1501, C.1502
No protein-ligand interaction detected (PLIP)MG.113: 3 residues within 4Å:- Chain A: A.103, G.327, G.328
No protein-ligand interaction detected (PLIP)MG.114: 3 residues within 4Å:- Chain A: G.253, G.254, G.262
No protein-ligand interaction detected (PLIP)MG.115: 1 residues within 4Å:- Chain A: U.1131
No protein-ligand interaction detected (PLIP)MG.116: 1 residues within 4Å:- Chain A: A.1346
No protein-ligand interaction detected (PLIP)MG.117: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.118: 3 residues within 4Å:- Chain A: A.1220, A.1281, C.1317
No protein-ligand interaction detected (PLIP)MG.119: 2 residues within 4Å:- Chain A: A.766, A.778
No protein-ligand interaction detected (PLIP)MG.120: 3 residues within 4Å:- Chain A: A.311, G.314
- Ligands: MG.151
No protein-ligand interaction detected (PLIP)MG.121: 3 residues within 4Å:- Chain A: G.836, C.846, G.847
No protein-ligand interaction detected (PLIP)MG.122: 3 residues within 4Å:- Chain A: G.922, G.923, A.924
No protein-ligand interaction detected (PLIP)MG.123: 3 residues within 4Å:- Chain A: A.942, G.1180, U.1181
No protein-ligand interaction detected (PLIP)MG.124: 1 residues within 4Å:- Chain A: G.293
No protein-ligand interaction detected (PLIP)MG.125: 2 residues within 4Å:- Chain A: G.143, A.167
No protein-ligand interaction detected (PLIP)MG.126: 3 residues within 4Å:- Chain A: G.954, U.1340, C.1341
No protein-ligand interaction detected (PLIP)MG.127: 1 residues within 4Å:- Chain A: G.1415
No protein-ligand interaction detected (PLIP)MG.128: 3 residues within 4Å:- Chain A: U.1506, G.1507, G.1508
No protein-ligand interaction detected (PLIP)MG.129: 2 residues within 4Å:- Chain A: U.1048, C.1049
No protein-ligand interaction detected (PLIP)MG.130: 1 residues within 4Å:- Chain A: G.622
No protein-ligand interaction detected (PLIP)MG.131: 1 residues within 4Å:- Chain A: G.1172
No protein-ligand interaction detected (PLIP)MG.132: 3 residues within 4Å:- Chain A: C.1285, G.1286, G.1287
No protein-ligand interaction detected (PLIP)MG.133: 2 residues within 4Å:- Chain A: U.119, G.120
No protein-ligand interaction detected (PLIP)MG.134: 4 residues within 4Å:- Chain A: C.502, G.514
- Chain L: P.44
- Ligands: A-A-A-U-U-U.1
No protein-ligand interaction detected (PLIP)MG.135: 1 residues within 4Å:- Chain A: A.1322
No protein-ligand interaction detected (PLIP)MG.136: 3 residues within 4Å:- Chain A: C.324, A.325, C.326
No protein-ligand interaction detected (PLIP)MG.137: 3 residues within 4Å:- Ligands: MG.165, MG.208, MG.225
No protein-ligand interaction detected (PLIP)MG.138: 4 residues within 4Å:- Chain A: A.1477, A.1478, G.1486, G.1499
No protein-ligand interaction detected (PLIP)MG.139: 3 residues within 4Å:- Chain A: G.1483, U.1484, U.1519
No protein-ligand interaction detected (PLIP)MG.140: 5 residues within 4Å:- Chain A: G.47, C.362, U.363, G.390
- Ligands: MG.263
No protein-ligand interaction detected (PLIP)MG.141: 3 residues within 4Å:- Chain A: U.500, G.501, U.515
No protein-ligand interaction detected (PLIP)MG.142: 4 residues within 4Å:- Chain A: U.518, A.519, G.522
- Ligands: K.274
No protein-ligand interaction detected (PLIP)MG.143: 2 residues within 4Å:- Chain A: G.1424
- Chain T: T.28
No protein-ligand interaction detected (PLIP)MG.144: 4 residues within 4Å:- Chain A: G.445, A.446, A.447
- Chain P: K.43
No protein-ligand interaction detected (PLIP)MG.145: 1 residues within 4Å:- Chain A: A.144
No protein-ligand interaction detected (PLIP)MG.146: 2 residues within 4Å:- Chain A: C.145, G.163
No protein-ligand interaction detected (PLIP)MG.147: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.148: 3 residues within 4Å:- Chain A: U.1108, U.1109
- Chain J: I.36
No protein-ligand interaction detected (PLIP)MG.149: 1 residues within 4Å:- Chain A: U.1109
No protein-ligand interaction detected (PLIP)MG.150: 1 residues within 4Å:- Ligands: MG.82
No protein-ligand interaction detected (PLIP)MG.151: 3 residues within 4Å:- Chain A: G.313, G.314
- Ligands: MG.120
No protein-ligand interaction detected (PLIP)MG.152: 5 residues within 4Å:- Chain A: C.902, G.903, G.905, U.1373, U.1374
No protein-ligand interaction detected (PLIP)MG.153: 3 residues within 4Å:- Chain A: U.1066, G.1067, U.1069
No protein-ligand interaction detected (PLIP)MG.154: 2 residues within 4Å:- Chain A: G.900, C.1052
No protein-ligand interaction detected (PLIP)MG.155: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.156: 6 residues within 4Å:- Chain A: G.1036, G.1040, G.1041, C.1042, G.1180, U.1181
No protein-ligand interaction detected (PLIP)MG.157: 1 residues within 4Å:- Chain A: U.6
No protein-ligand interaction detected (PLIP)MG.158: 4 residues within 4Å:- Chain A: G.62, U.63, G.99, C.100
No protein-ligand interaction detected (PLIP)MG.159: 5 residues within 4Å:- Chain A: G.559, G.560, G.742, G.805, C.858
No protein-ligand interaction detected (PLIP)MG.160: 3 residues within 4Å:- Chain A: G.28, G.29
- Ligands: MG.217
No protein-ligand interaction detected (PLIP)MG.161: 4 residues within 4Å:- Chain A: U.928, G.1206, A.1306, C.1345
No protein-ligand interaction detected (PLIP)MG.162: 2 residues within 4Å:- Chain A: G.1400, G.1460
No protein-ligand interaction detected (PLIP)MG.163: 1 residues within 4Å:- Chain A: G.526
No protein-ligand interaction detected (PLIP)MG.164: 2 residues within 4Å:- Chain A: G.809, G.852
No protein-ligand interaction detected (PLIP)MG.165: 2 residues within 4Å:- Ligands: MG.137, K.271
No protein-ligand interaction detected (PLIP)MG.166: 2 residues within 4Å:- Chain A: A.946, C.948
No protein-ligand interaction detected (PLIP)MG.167: 1 residues within 4Å:- Ligands: A-A-A-U-U-U.1
No protein-ligand interaction detected (PLIP)MG.168: 4 residues within 4Å:- Chain A: U.1073, U.1074, G.1077, U.1078
No protein-ligand interaction detected (PLIP)MG.169: 2 residues within 4Å:- Chain A: G.769, G.770
No protein-ligand interaction detected (PLIP)MG.170: 3 residues within 4Å:- Chain A: G.1415, C.1444, G.1445
No protein-ligand interaction detected (PLIP)MG.171: 2 residues within 4Å:- Chain A: G.1368, G.1369
No protein-ligand interaction detected (PLIP)MG.172: 1 residues within 4Å:- Chain A: G.931
No protein-ligand interaction detected (PLIP)MG.173: 2 residues within 4Å:- Chain A: G.802
- Ligands: MG.12
No protein-ligand interaction detected (PLIP)MG.174: 2 residues within 4Å:- Chain A: A.686, G.687
No protein-ligand interaction detected (PLIP)MG.175: 1 residues within 4Å:- Chain A: C.950
No protein-ligand interaction detected (PLIP)MG.176: 5 residues within 4Å:- Chain A: G.675, U.676
- Chain K: N.16, G.42, K.45
1 PLIP interactions:1 interactions with chain K- Metal complexes: K:N.16
MG.177: 4 residues within 4Å:- Chain A: G.101, G.320, A.321, G.322
No protein-ligand interaction detected (PLIP)MG.178: 2 residues within 4Å:- Chain A: A.258, G.320
No protein-ligand interaction detected (PLIP)MG.179: 3 residues within 4Å:- Chain A: U.773, A.774, G.775
No protein-ligand interaction detected (PLIP)MG.180: 2 residues within 4Å:- Chain A: A.1029, G.1030
No protein-ligand interaction detected (PLIP)MG.181: 3 residues within 4Å:- Chain A: C.940, C.1034, U.1035
No protein-ligand interaction detected (PLIP)MG.182: 3 residues within 4Å:- Chain A: G.711
- Ligands: MG.189, MG.209
No protein-ligand interaction detected (PLIP)MG.183: 4 residues within 4Å:- Chain A: G.70, G.71, G.92, U.93
No protein-ligand interaction detected (PLIP)MG.184: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.185: 1 residues within 4Å:- Chain A: G.1248
No protein-ligand interaction detected (PLIP)MG.186: 3 residues within 4Å:- Chain A: A.592, G.594, G.614
No protein-ligand interaction detected (PLIP)MG.187: 1 residues within 4Å:- Chain A: G.256
No protein-ligand interaction detected (PLIP)MG.188: 2 residues within 4Å:- Chain A: U.300, G.301
No protein-ligand interaction detected (PLIP)MG.189: 1 residues within 4Å:- Ligands: MG.182
No protein-ligand interaction detected (PLIP)MG.190: 2 residues within 4Å:- Chain A: G.579, U.625
No protein-ligand interaction detected (PLIP)MG.191: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.192: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.193: 5 residues within 4Å:- Chain A: G.1067, U.1068, U.1069, G.1082, C.1083
No protein-ligand interaction detected (PLIP)MG.194: 3 residues within 4Å:- Chain A: U.1108, U.1109, U.1263
No protein-ligand interaction detected (PLIP)MG.195: 3 residues within 4Å:- Chain A: C.703, G.705, A.706
No protein-ligand interaction detected (PLIP)MG.196: 2 residues within 4Å:- Chain A: C.912, U.1327
No protein-ligand interaction detected (PLIP)MG.197: 1 residues within 4Å:- Chain A: G.251
No protein-ligand interaction detected (PLIP)MG.198: 2 residues within 4Å:- Chain A: U.82, U.83
No protein-ligand interaction detected (PLIP)MG.199: 1 residues within 4Å:- Ligands: MG.205
No protein-ligand interaction detected (PLIP)MG.200: 4 residues within 4Å:- Chain A: C.368, U.371, G.372, U.383
No protein-ligand interaction detected (PLIP)MG.201: 1 residues within 4Å:- Chain A: U.235
No protein-ligand interaction detected (PLIP)MG.202: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.203: 1 residues within 4Å:- Chain A: A.786
No protein-ligand interaction detected (PLIP)MG.204: 2 residues within 4Å:- Chain A: G.758, G.787
No protein-ligand interaction detected (PLIP)MG.205: 1 residues within 4Å:- Ligands: MG.199
No protein-ligand interaction detected (PLIP)MG.206: 1 residues within 4Å:- Chain A: G.91
No protein-ligand interaction detected (PLIP)MG.207: 1 residues within 4Å:- Chain A: G.69
No protein-ligand interaction detected (PLIP)MG.208: 2 residues within 4Å:- Chain A: G.561
- Ligands: MG.137
No protein-ligand interaction detected (PLIP)MG.209: 1 residues within 4Å:- Ligands: MG.182
No protein-ligand interaction detected (PLIP)MG.210: 1 residues within 4Å:- Chain A: C.381
No protein-ligand interaction detected (PLIP)MG.211: 3 residues within 4Å:- Chain A: U.1066, G.1067, U.1068
No protein-ligand interaction detected (PLIP)MG.212: 3 residues within 4Å:- Chain A: G.305, G.306
- Ligands: MG.37
No protein-ligand interaction detected (PLIP)MG.213: 2 residues within 4Å:- Chain A: G.297, G.298
No protein-ligand interaction detected (PLIP)MG.214: 3 residues within 4Å:- Chain A: C.779, C.780, U.1484
No protein-ligand interaction detected (PLIP)MG.215: 1 residues within 4Å:- Ligands: MG.216
No protein-ligand interaction detected (PLIP)MG.216: 3 residues within 4Å:- Chain A: G.565
- Ligands: MG.43, MG.215
No protein-ligand interaction detected (PLIP)MG.217: 2 residues within 4Å:- Chain A: G.30
- Ligands: MG.160
No protein-ligand interaction detected (PLIP)MG.218: 3 residues within 4Å:- Chain A: G.141, G.142
- Ligands: MG.219
No protein-ligand interaction detected (PLIP)MG.219: 4 residues within 4Å:- Chain A: G.140, G.141, A.204
- Ligands: MG.218
No protein-ligand interaction detected (PLIP)MG.220: 3 residues within 4Å:- Chain A: A.138, G.139, A.203
No protein-ligand interaction detected (PLIP)MG.221: 4 residues within 4Å:- Chain A: A.278, C.279
- Ligands: MG.222, MG.223
No protein-ligand interaction detected (PLIP)MG.222: 3 residues within 4Å:- Chain A: G.272
- Ligands: MG.221, MG.223
No protein-ligand interaction detected (PLIP)MG.223: 4 residues within 4Å:- Chain A: C.244, U.245
- Ligands: MG.221, MG.222
No protein-ligand interaction detected (PLIP)MG.224: 1 residues within 4Å:- Chain A: C.844
No protein-ligand interaction detected (PLIP)MG.225: 3 residues within 4Å:- Chain A: C.860, C.861
- Ligands: MG.137
No protein-ligand interaction detected (PLIP)MG.226: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.227: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.228: 1 residues within 4Å:- Chain A: G.134
No protein-ligand interaction detected (PLIP)MG.229: 4 residues within 4Å:- Chain A: G.247, U.248, C.263, C.264
No protein-ligand interaction detected (PLIP)MG.230: 2 residues within 4Å:- Chain A: C.188, G.191
No protein-ligand interaction detected (PLIP)MG.231: 2 residues within 4Å:- Chain A: A.54, A.349
No protein-ligand interaction detected (PLIP)MG.232: 4 residues within 4Å:- Chain A: G.1206, A.1207, C.1304
- Chain M: Q.100
No protein-ligand interaction detected (PLIP)MG.233: 2 residues within 4Å:- Chain A: G.694, G.695
No protein-ligand interaction detected (PLIP)MG.234: 1 residues within 4Å:- Ligands: MG.106
No protein-ligand interaction detected (PLIP)MG.235: 3 residues within 4Å:- Chain A: U.899, G.900, U.1376
No protein-ligand interaction detected (PLIP)MG.236: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.237: 2 residues within 4Å:- Chain A: G.1275, G.1276
No protein-ligand interaction detected (PLIP)MG.238: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.239: 3 residues within 4Å:- Chain A: G.682, G.782, G.783
No protein-ligand interaction detected (PLIP)MG.240: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.241: 2 residues within 4Å:- Chain A: U.689, A.690
No protein-ligand interaction detected (PLIP)MG.242: 4 residues within 4Å:- Chain A: C.801, G.802, C.1505, U.1506
No protein-ligand interaction detected (PLIP)MG.243: 1 residues within 4Å:- Chain A: U.257
No protein-ligand interaction detected (PLIP)MG.244: 1 residues within 4Å:- Chain A: G.617
No protein-ligand interaction detected (PLIP)MG.245: 3 residues within 4Å:- Chain A: C.685, A.686, G.687
No protein-ligand interaction detected (PLIP)MG.246: 2 residues within 4Å:- Chain A: U.80, U.81
No protein-ligand interaction detected (PLIP)MG.247: 2 residues within 4Å:- Chain A: G.280, G.281
No protein-ligand interaction detected (PLIP)MG.248: 1 residues within 4Å:- Chain A: A.294
No protein-ligand interaction detected (PLIP)MG.249: 3 residues within 4Å:- Chain A: G.1398, G.1399, G.1400
No protein-ligand interaction detected (PLIP)MG.250: 4 residues within 4Å:- Chain A: G.929, U.930, C.948, C.1212
No protein-ligand interaction detected (PLIP)MG.251: 4 residues within 4Å:- Chain A: G.16, A.17, U.898, A.1379
No protein-ligand interaction detected (PLIP)MG.252: 1 residues within 4Å:- Chain A: A.136
No protein-ligand interaction detected (PLIP)MG.253: 1 residues within 4Å:- Chain A: U.773
No protein-ligand interaction detected (PLIP)MG.254: 2 residues within 4Å:- Chain A: G.802, C.806
No protein-ligand interaction detected (PLIP)MG.255: 2 residues within 4Å:- Chain A: G.76, G.77
No protein-ligand interaction detected (PLIP)MG.256: 3 residues within 4Å:- Chain A: A.325, G.328, G.329
No protein-ligand interaction detected (PLIP)MG.257: 1 residues within 4Å:- Chain A: U.1510
No protein-ligand interaction detected (PLIP)MG.258: 3 residues within 4Å:- Chain A: G.904, G.1483, C.1521
No protein-ligand interaction detected (PLIP)MG.259: 1 residues within 4Å:- Chain A: G.641
No protein-ligand interaction detected (PLIP)MG.260: 3 residues within 4Å:- Chain A: G.1508, A.1509, U.1510
No protein-ligand interaction detected (PLIP)MG.261: 2 residues within 4Å:- Chain A: G.905, A.1481
No protein-ligand interaction detected (PLIP)MG.262: 1 residues within 4Å:- Chain A: G.1498
No protein-ligand interaction detected (PLIP)MG.263: 4 residues within 4Å:- Chain A: U.46, G.47, G.390
- Ligands: MG.140
No protein-ligand interaction detected (PLIP)MG.264: 2 residues within 4Å:- Chain A: U.38, G.39
No protein-ligand interaction detected (PLIP)MG.265: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.266: 4 residues within 4Å:- Chain A: A.879, G.880, C.1492
- Ligands: MG.267
No protein-ligand interaction detected (PLIP)MG.267: 1 residues within 4Å:- Ligands: MG.266
No protein-ligand interaction detected (PLIP)MG.296: 5 residues within 4Å:- Chain A: U.1312
- Chain M: T.19, I.21, Y.22, I.24
3 PLIP interactions:3 interactions with chain M- Metal complexes: M:T.19, M:I.21, M:I.24
MG.297: 1 residues within 4Å:- Chain C: V.129
No protein-ligand interaction detected (PLIP)MG.299: 5 residues within 4Å:- Chain D: A.81, S.82, K.84, G.86, T.88
3 PLIP interactions:2 interactions with chain D, 1 Ligand-Water interactions- Metal complexes: D:K.84, D:T.88, H2O.9
MG.300: 1 residues within 4Å:- Chain E: E.64
No protein-ligand interaction detected (PLIP)MG.301: 3 residues within 4Å:- Chain F: R.80, R.82, V.85
3 PLIP interactions:3 interactions with chain F- Metal complexes: F:R.80, F:R.82, F:V.85
MG.302: 2 residues within 4Å:- Chain G: Q.105, K.136
No protein-ligand interaction detected (PLIP)MG.304: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.305: 1 residues within 4Å:- Chain L: E.12
No protein-ligand interaction detected (PLIP)MG.306: 2 residues within 4Å:- Chain L: Q.74, D.102
No protein-ligand interaction detected (PLIP)MG.308: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.309: 1 residues within 4Å:- Chain P: R.57
No protein-ligand interaction detected (PLIP)MG.310: 2 residues within 4Å:- Chain P: W.48, L.49
No protein-ligand interaction detected (PLIP)MG.311: 1 residues within 4Å:- Chain P: G.37
No protein-ligand interaction detected (PLIP)MG.312: 4 residues within 4Å:- Chain Q: D.12, M.14, T.17, E.48
4 PLIP interactions:4 interactions with chain Q- Metal complexes: Q:D.12, Q:M.14, Q:E.48, Q:E.48
MG.313: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.314: 4 residues within 4Å:- Chain A: U.933, C.1208, A.1209
- Chain S: R.80
No protein-ligand interaction detected (PLIP)MG.315: 1 residues within 4Å:- Chain S: R.80
No protein-ligand interaction detected (PLIP)MG.316: 3 residues within 4Å:- Chain A: U.1295
- Chain S: K.5, K.6
1 PLIP interactions:1 interactions with chain S- Metal complexes: S:K.5
MG.317: 2 residues within 4Å:- Chain T: S.4, A.5
1 PLIP interactions:1 interactions with chain T- Metal complexes: T:S.4
MG.318: 1 residues within 4Å:- Chain V: A.8
No protein-ligand interaction detected (PLIP)- 29 x K: POTASSIUM ION(Non-functional Binders)(Non-covalent)
K.268: 3 residues within 4Å:- Chain A: U.128, U.225, G.226
Ligand excluded by PLIPK.269: 2 residues within 4Å:- Chain A: U.841, C.844
Ligand excluded by PLIPK.270: 1 residues within 4Å:- Ligands: MG.44
Ligand excluded by PLIPK.271: 3 residues within 4Å:- Chain A: G.560, G.561
- Ligands: MG.165
Ligand excluded by PLIPK.272: 2 residues within 4Å:- Chain A: G.1071, G.1072
Ligand excluded by PLIPK.273: 1 residues within 4Å:- Chain A: U.15
Ligand excluded by PLIPK.274: 2 residues within 4Å:- Chain A: C.520
- Ligands: MG.142
Ligand excluded by PLIPK.275: 0 residues within 4Å:- (No contacts)
Ligand excluded by PLIPK.276: 4 residues within 4Å:- Chain A: G.457, A.458, G.459, G.460
Ligand excluded by PLIPK.277: 1 residues within 4Å:- Chain A: G.1168
Ligand excluded by PLIPK.278: 2 residues within 4Å:- Chain A: G.672, G.684
Ligand excluded by PLIPK.279: 0 residues within 4Å:- (No contacts)
Ligand excluded by PLIPK.280: 2 residues within 4Å:- Chain A: A.296, C.548
Ligand excluded by PLIPK.281: 3 residues within 4Å:- Chain A: G.477, G.478
- Ligands: MG.87
Ligand excluded by PLIPK.282: 0 residues within 4Å:- (No contacts)
Ligand excluded by PLIPK.283: 0 residues within 4Å:- (No contacts)
Ligand excluded by PLIPK.284: 1 residues within 4Å:- Chain A: G.222
Ligand excluded by PLIPK.285: 3 residues within 4Å:- Chain A: G.1425, A.1427, G.1428
Ligand excluded by PLIPK.286: 2 residues within 4Å:- Chain A: G.920, C.1318
Ligand excluded by PLIPK.287: 4 residues within 4Å:- Chain A: G.588, U.589, G.617, C.618
Ligand excluded by PLIPK.288: 3 residues within 4Å:- Chain A: A.146, G.162, G.163
Ligand excluded by PLIPK.289: 4 residues within 4Å:- Chain A: C.1037, U.1178, G.1179
- Ligands: MG.99
Ligand excluded by PLIPK.290: 1 residues within 4Å:- Chain A: C.840
Ligand excluded by PLIPK.291: 2 residues within 4Å:- Chain A: C.503, A.504
Ligand excluded by PLIPK.292: 1 residues within 4Å:- Chain A: G.708
Ligand excluded by PLIPK.293: 5 residues within 4Å:- Chain A: C.348, C.351, A.352, G.353
- Ligands: PAR.4
Ligand excluded by PLIPK.294: 2 residues within 4Å:- Chain A: G.1494, G.1498
Ligand excluded by PLIPK.295: 0 residues within 4Å:- (No contacts)
Ligand excluded by PLIPK.303: 1 residues within 4Å:- Chain G: R.78
Ligand excluded by PLIP- 2 x ZN: ZINC ION(Non-covalent)
ZN.298: 5 residues within 4Å:- Chain D: C.8, C.11, L.18, C.25, C.30
4 PLIP interactions:4 interactions with chain D- Metal complexes: D:C.8, D:C.11, D:C.25, D:C.30
ZN.307: 4 residues within 4Å:- Chain N: C.23, C.26, C.39, C.42
4 PLIP interactions:4 interactions with chain N- Metal complexes: N:C.23, N:C.26, N:C.39, N:C.42
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Choi, J. et al., N(6)-methyladenosine in mRNA disrupts tRNA selection and translation-elongation dynamics. Nat.Struct.Mol.Biol. (2016)
- Release Date
- 2015-11-18
- Peptides
- 30S ribosomal protein S2: B
30S ribosomal protein S3: C
30S ribosomal protein S4: D
30S ribosomal protein S5: E
30S ribosomal protein S6: F
30S ribosomal protein S7: G
30S ribosomal protein S8: H
30S ribosomal protein S9: I
30S ribosomal protein S10: J
30S ribosomal protein S11: K
30S ribosomal protein S12: L
30S ribosomal protein S13: M
30S ribosomal protein S14 type Z: N
30S ribosomal protein S15: O
30S ribosomal protein S16: P
30S ribosomal protein S17: Q
30S ribosomal protein S18: R
30S ribosomal protein S19: S
30S ribosomal protein S20: T
30S ribosomal protein Thx: U - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:B
BC
CD
DE
EF
FG
GH
HI
IJ
JK
KL
LM
MN
NO
OP
PQ
QR
RS
ST
TU
U
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.45 Å
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 1 x A- A- A- U- U- U: RNA (5'-D(*AP*AP*AP*UP*UP*U)-3')(Non-covalent)
- 6 x PAR: PAROMOMYCIN(Non-functional Binders)(Non-covalent)
- 280 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
- 29 x K: POTASSIUM ION(Non-functional Binders)(Non-covalent)
- 2 x ZN: ZINC ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Choi, J. et al., N(6)-methyladenosine in mRNA disrupts tRNA selection and translation-elongation dynamics. Nat.Struct.Mol.Biol. (2016)
- Release Date
- 2015-11-18
- Peptides
- 30S ribosomal protein S2: B
30S ribosomal protein S3: C
30S ribosomal protein S4: D
30S ribosomal protein S5: E
30S ribosomal protein S6: F
30S ribosomal protein S7: G
30S ribosomal protein S8: H
30S ribosomal protein S9: I
30S ribosomal protein S10: J
30S ribosomal protein S11: K
30S ribosomal protein S12: L
30S ribosomal protein S13: M
30S ribosomal protein S14 type Z: N
30S ribosomal protein S15: O
30S ribosomal protein S16: P
30S ribosomal protein S17: Q
30S ribosomal protein S18: R
30S ribosomal protein S19: S
30S ribosomal protein S20: T
30S ribosomal protein Thx: U - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:B
BC
CD
DE
EF
FG
GH
HI
IJ
JK
KL
LM
MN
NO
OP
PQ
QR
RS
ST
TU
U