- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.45 Å
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 1 x A- A- 6MZ- U- U- U: RNA (5'-D(*AP*AP*(MA6)P*UP*UP*U)-3')(Non-covalent)
- 6 x PAR: PAROMOMYCIN(Non-functional Binders)(Non-covalent)
- 301 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
MG.8: 1 residues within 4Å:- Chain A: U.210
No protein-ligand interaction detected (PLIP)MG.9: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.10: 1 residues within 4Å:- Chain A: A.737
No protein-ligand interaction detected (PLIP)MG.11: 2 residues within 4Å:- Chain A: C.733, G.734
No protein-ligand interaction detected (PLIP)MG.12: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.13: 3 residues within 4Å:- Chain A: A.110, G.111, G.285
No protein-ligand interaction detected (PLIP)MG.14: 5 residues within 4Å:- Chain A: C.49, U.50, A.52, G.109
- Ligands: PAR.4
No protein-ligand interaction detected (PLIP)MG.15: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.16: 1 residues within 4Å:- Chain A: G.784
No protein-ligand interaction detected (PLIP)MG.17: 3 residues within 4Å:- Chain A: U.1484, G.1486, U.1500
No protein-ligand interaction detected (PLIP)MG.18: 5 residues within 4Å:- Chain A: A.1478, G.1482, G.1483, A.1485, G.1486
No protein-ligand interaction detected (PLIP)MG.19: 1 residues within 4Å:- Chain A: G.1504
No protein-ligand interaction detected (PLIP)MG.20: 3 residues within 4Å:- Chain A: C.604, A.605
- Chain D: R.140
No protein-ligand interaction detected (PLIP)MG.21: 3 residues within 4Å:- Chain A: A.113, G.282, U.283
No protein-ligand interaction detected (PLIP)MG.22: 1 residues within 4Å:- Chain A: A.915
No protein-ligand interaction detected (PLIP)MG.23: 2 residues within 4Å:- Chain A: G.22, G.551
No protein-ligand interaction detected (PLIP)MG.24: 5 residues within 4Å:- Chain A: A.547, C.548, U.549, G.550, G.551
No protein-ligand interaction detected (PLIP)MG.25: 1 residues within 4Å:- Chain A: A.842
No protein-ligand interaction detected (PLIP)MG.26: 1 residues within 4Å:- Chain A: U.545
No protein-ligand interaction detected (PLIP)MG.27: 1 residues within 4Å:- Chain A: A.752
No protein-ligand interaction detected (PLIP)MG.28: 2 residues within 4Å:- Chain A: G.406, A.427
No protein-ligand interaction detected (PLIP)MG.29: 3 residues within 4Å:- Chain A: A.750, C.796, U.797
No protein-ligand interaction detected (PLIP)MG.30: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.31: 1 residues within 4Å:- Chain A: U.756
No protein-ligand interaction detected (PLIP)MG.32: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.33: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.34: 3 residues within 4Å:- Chain A: C.399, A.531, G.532
No protein-ligand interaction detected (PLIP)MG.35: 1 residues within 4Å:- Chain A: G.39
No protein-ligand interaction detected (PLIP)MG.36: 1 residues within 4Å:- Chain A: U.290
No protein-ligand interaction detected (PLIP)MG.37: 5 residues within 4Å:- Chain A: G.12, U.13, G.22, G.23, C.24
No protein-ligand interaction detected (PLIP)MG.38: 4 residues within 4Å:- Chain A: G.302, C.303, G.305
- Ligands: MG.224
No protein-ligand interaction detected (PLIP)MG.39: 2 residues within 4Å:- Chain A: U.544, G.550
No protein-ligand interaction detected (PLIP)MG.40: 1 residues within 4Å:- Chain A: G.534
No protein-ligand interaction detected (PLIP)MG.41: 2 residues within 4Å:- Chain A: G.572, G.628
No protein-ligand interaction detected (PLIP)MG.42: 4 residues within 4Å:- Chain A: G.579, C.580, G.581, U.582
No protein-ligand interaction detected (PLIP)MG.43: 4 residues within 4Å:- Chain A: U.555, A.556, A.557, A.558
No protein-ligand interaction detected (PLIP)MG.44: 3 residues within 4Å:- Chain A: U.564, G.565, U.741
No protein-ligand interaction detected (PLIP)MG.45: 3 residues within 4Å:- Chain A: C.287, G.301
- Ligands: K.290
No protein-ligand interaction detected (PLIP)MG.46: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.47: 2 residues within 4Å:- Chain A: G.561, C.562
No protein-ligand interaction detected (PLIP)MG.48: 1 residues within 4Å:- Chain A: G.881
No protein-ligand interaction detected (PLIP)MG.49: 1 residues within 4Å:- Chain A: G.615
No protein-ligand interaction detected (PLIP)MG.50: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.51: 2 residues within 4Å:- Chain A: C.276
- Chain Q: S.38
1 PLIP interactions:1 interactions with chain Q- Metal complexes: Q:S.38
MG.52: 7 residues within 4Å:- Chain A: C.115, G.118, U.119, G.120, C.231, G.232, C.233
No protein-ligand interaction detected (PLIP)MG.53: 2 residues within 4Å:- Chain A: G.715, C.1505
No protein-ligand interaction detected (PLIP)MG.54: 1 residues within 4Å:- Chain A: U.630
No protein-ligand interaction detected (PLIP)MG.55: 2 residues within 4Å:- Chain A: C.506, C.520
No protein-ligand interaction detected (PLIP)MG.56: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.57: 2 residues within 4Å:- Chain A: A.838, G.839
No protein-ligand interaction detected (PLIP)MG.58: 4 residues within 4Å:- Chain A: A.843, C.844, G.1060, G.1062
No protein-ligand interaction detected (PLIP)MG.59: 6 residues within 4Å:- Chain A: U.1056, G.1057, C.1058, G.1065, U.1066, G.1067
No protein-ligand interaction detected (PLIP)MG.60: 1 residues within 4Å:- Chain A: G.16
No protein-ligand interaction detected (PLIP)MG.61: 5 residues within 4Å:- Chain A: U.1476, A.1477, A.1478, G.1482, G.1483
No protein-ligand interaction detected (PLIP)MG.62: 2 residues within 4Å:- Chain A: A.556, A.803
No protein-ligand interaction detected (PLIP)MG.63: 2 residues within 4Å:- Chain A: U.1078, G.1091
No protein-ligand interaction detected (PLIP)MG.64: 2 residues within 4Å:- Chain A: U.1066
- Chain E: R.23
No protein-ligand interaction detected (PLIP)MG.65: 3 residues within 4Å:- Chain A: C.1092, A.1093, C.1171
No protein-ligand interaction detected (PLIP)MG.66: 2 residues within 4Å:- Chain A: G.1060, G.1062
No protein-ligand interaction detected (PLIP)MG.67: 2 residues within 4Å:- Chain A: G.872, G.873
No protein-ligand interaction detected (PLIP)MG.68: 7 residues within 4Å:- Chain A: G.563, U.564, G.565, A.743, G.744, G.745, C.746
No protein-ligand interaction detected (PLIP)MG.69: 2 residues within 4Å:- Chain A: G.107, C.304
No protein-ligand interaction detected (PLIP)MG.70: 1 residues within 4Å:- Chain A: C.348
No protein-ligand interaction detected (PLIP)MG.71: 1 residues within 4Å:- Chain A: G.65
No protein-ligand interaction detected (PLIP)MG.72: 1 residues within 4Å:- Chain A: G.387
No protein-ligand interaction detected (PLIP)MG.73: 2 residues within 4Å:- Chain A: C.59, U.383
No protein-ligand interaction detected (PLIP)MG.74: 2 residues within 4Å:- Chain A: C.488, G.489
No protein-ligand interaction detected (PLIP)MG.75: 2 residues within 4Å:- Chain A: G.490, A.493
No protein-ligand interaction detected (PLIP)MG.76: 2 residues within 4Å:- Chain A: G.864, G.865
No protein-ligand interaction detected (PLIP)MG.77: 4 residues within 4Å:- Chain A: U.500, A.516, A.517
- Ligands: MG.144
No protein-ligand interaction detected (PLIP)MG.78: 1 residues within 4Å:- Chain A: G.876
No protein-ligand interaction detected (PLIP)MG.79: 3 residues within 4Å:- Chain A: A.174, C.201, A.202
No protein-ligand interaction detected (PLIP)MG.80: 3 residues within 4Å:- Chain A: C.1380, C.1385
- Ligands: A-A-6MZ-U-U-U.1
No protein-ligand interaction detected (PLIP)MG.81: 1 residues within 4Å:- Chain A: A.867
No protein-ligand interaction detected (PLIP)MG.82: 2 residues within 4Å:- Chain A: U.177, G.178
No protein-ligand interaction detected (PLIP)MG.83: 1 residues within 4Å:- Chain A: A.761
No protein-ligand interaction detected (PLIP)MG.84: 3 residues within 4Å:- Chain A: C.763, A.764
- Chain K: K.112
No protein-ligand interaction detected (PLIP)MG.85: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.86: 2 residues within 4Å:- Chain A: G.1439, G.1440
No protein-ligand interaction detected (PLIP)MG.87: 1 residues within 4Å:- Chain A: C.449
No protein-ligand interaction detected (PLIP)MG.88: 3 residues within 4Å:- Chain A: G.476, G.477
- Ligands: K.309
No protein-ligand interaction detected (PLIP)MG.89: 2 residues within 4Å:- Chain A: G.357, G.358
No protein-ligand interaction detected (PLIP)MG.90: 2 residues within 4Å:- Chain A: G.460, G.461
No protein-ligand interaction detected (PLIP)MG.91: 2 residues within 4Å:- Chain A: G.611
- Ligands: PAR.6
No protein-ligand interaction detected (PLIP)MG.92: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.93: 3 residues within 4Å:- Chain A: A.467, G.469, G.470
No protein-ligand interaction detected (PLIP)MG.94: 2 residues within 4Å:- Chain A: G.105, G.106
No protein-ligand interaction detected (PLIP)MG.95: 2 residues within 4Å:- Chain A: G.320, G.322
No protein-ligand interaction detected (PLIP)MG.96: 3 residues within 4Å:- Chain A: C.169, C.170, A.204
No protein-ligand interaction detected (PLIP)MG.97: 6 residues within 4Å:- Chain A: A.294, G.295, G.542, A.543, U.544, G.550
No protein-ligand interaction detected (PLIP)MG.98: 2 residues within 4Å:- Chain A: A.896, A.897
No protein-ligand interaction detected (PLIP)MG.99: 5 residues within 4Å:- Chain A: A.1050, G.1051, G.1077, G.1370, C.1371
No protein-ligand interaction detected (PLIP)MG.100: 5 residues within 4Å:- Chain A: G.1036, C.1037, G.1179, G.1180
- Ligands: K.322
No protein-ligand interaction detected (PLIP)MG.101: 3 residues within 4Å:- Chain A: C.1037, G.1179, G.1180
No protein-ligand interaction detected (PLIP)MG.102: 3 residues within 4Å:- Chain A: A.649, G.650, G.651
No protein-ligand interaction detected (PLIP)MG.103: 2 residues within 4Å:- Chain A: G.434, U.479
No protein-ligand interaction detected (PLIP)MG.104: 1 residues within 4Å:- Chain A: C.958
No protein-ligand interaction detected (PLIP)MG.105: 2 residues within 4Å:- Chain A: G.1475, U.1476
No protein-ligand interaction detected (PLIP)MG.106: 1 residues within 4Å:- Chain A: G.684
No protein-ligand interaction detected (PLIP)MG.107: 3 residues within 4Å:- Chain A: U.1519, U.1520
- Ligands: MG.250
No protein-ligand interaction detected (PLIP)MG.108: 2 residues within 4Å:- Chain A: U.1032
- Chain N: A.1
No protein-ligand interaction detected (PLIP)MG.109: 2 residues within 4Å:- Chain A: G.1353, G.1354
No protein-ligand interaction detected (PLIP)MG.110: 2 residues within 4Å:- Chain A: C.453, C.456
No protein-ligand interaction detected (PLIP)MG.111: 4 residues within 4Å:- Chain A: C.1285, G.1286, G.1287
- Chain U: D.4
No protein-ligand interaction detected (PLIP)MG.112: 1 residues within 4Å:- Chain A: G.1206
No protein-ligand interaction detected (PLIP)MG.113: 7 residues within 4Å:- Chain A: U.1488, G.1489, U.1490, A.1491, U.1500, G.1501, C.1502
No protein-ligand interaction detected (PLIP)MG.114: 3 residues within 4Å:- Chain A: G.102, A.103, G.327
No protein-ligand interaction detected (PLIP)MG.115: 3 residues within 4Å:- Chain A: G.253, G.254, G.262
No protein-ligand interaction detected (PLIP)MG.116: 1 residues within 4Å:- Chain A: G.1103
No protein-ligand interaction detected (PLIP)MG.117: 1 residues within 4Å:- Chain A: G.1338
No protein-ligand interaction detected (PLIP)MG.118: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.119: 4 residues within 4Å:- Chain A: A.1220, A.1281, U.1283, C.1317
No protein-ligand interaction detected (PLIP)MG.120: 3 residues within 4Å:- Chain A: A.766, A.778, G.1499
No protein-ligand interaction detected (PLIP)MG.121: 2 residues within 4Å:- Chain A: A.311, G.314
No protein-ligand interaction detected (PLIP)MG.122: 3 residues within 4Å:- Chain A: G.836, C.846, G.847
No protein-ligand interaction detected (PLIP)MG.123: 2 residues within 4Å:- Chain A: G.922, G.923
No protein-ligand interaction detected (PLIP)MG.124: 3 residues within 4Å:- Chain A: A.942, G.1180, U.1181
No protein-ligand interaction detected (PLIP)MG.125: 1 residues within 4Å:- Ligands: K.292
No protein-ligand interaction detected (PLIP)MG.126: 2 residues within 4Å:- Chain A: G.143, A.167
No protein-ligand interaction detected (PLIP)MG.127: 3 residues within 4Å:- Chain A: G.954, U.1340, C.1341
No protein-ligand interaction detected (PLIP)MG.128: 2 residues within 4Å:- Chain A: G.1415, C.1444
No protein-ligand interaction detected (PLIP)MG.129: 3 residues within 4Å:- Chain A: U.1506, G.1507, G.1508
No protein-ligand interaction detected (PLIP)MG.130: 2 residues within 4Å:- Chain A: U.1048, C.1049
No protein-ligand interaction detected (PLIP)MG.131: 1 residues within 4Å:- Chain A: G.622
No protein-ligand interaction detected (PLIP)MG.132: 1 residues within 4Å:- Chain A: G.1172
No protein-ligand interaction detected (PLIP)MG.133: 3 residues within 4Å:- Chain A: C.1285, G.1286, G.1287
No protein-ligand interaction detected (PLIP)MG.134: 2 residues within 4Å:- Chain A: U.119, G.120
No protein-ligand interaction detected (PLIP)MG.135: 4 residues within 4Å:- Chain A: C.502, G.514
- Chain L: P.44
- Ligands: A-A-6MZ-U-U-U.1
No protein-ligand interaction detected (PLIP)MG.136: 1 residues within 4Å:- Chain A: U.1323
No protein-ligand interaction detected (PLIP)MG.137: 4 residues within 4Å:- Chain A: C.310, C.324, A.325, C.326
No protein-ligand interaction detected (PLIP)MG.138: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.139: 2 residues within 4Å:- Ligands: MG.217, MG.239
No protein-ligand interaction detected (PLIP)MG.140: 4 residues within 4Å:- Chain A: A.1477, A.1478, G.1486, G.1499
No protein-ligand interaction detected (PLIP)MG.141: 3 residues within 4Å:- Chain A: G.1483, U.1484, U.1519
No protein-ligand interaction detected (PLIP)MG.142: 5 residues within 4Å:- Chain A: G.47, C.362, U.363, G.390
- Ligands: MG.283
No protein-ligand interaction detected (PLIP)MG.143: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.144: 4 residues within 4Å:- Chain A: G.499, G.501, A.516
- Ligands: MG.77
No protein-ligand interaction detected (PLIP)MG.145: 3 residues within 4Å:- Chain A: U.518, A.519
- Ligands: K.296
No protein-ligand interaction detected (PLIP)MG.146: 2 residues within 4Å:- Chain A: C.279, G.280
No protein-ligand interaction detected (PLIP)MG.147: 2 residues within 4Å:- Chain A: G.1424
- Chain T: T.28
No protein-ligand interaction detected (PLIP)MG.148: 4 residues within 4Å:- Chain A: G.445, A.446, A.447
- Chain P: K.43
No protein-ligand interaction detected (PLIP)MG.149: 1 residues within 4Å:- Chain A: A.144
No protein-ligand interaction detected (PLIP)MG.150: 1 residues within 4Å:- Chain A: G.163
No protein-ligand interaction detected (PLIP)MG.151: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.152: 3 residues within 4Å:- Chain A: U.1108, U.1109
- Chain J: I.36
No protein-ligand interaction detected (PLIP)MG.153: 2 residues within 4Å:- Chain A: U.1108, U.1109
No protein-ligand interaction detected (PLIP)MG.154: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.155: 2 residues within 4Å:- Chain A: G.313, G.314
No protein-ligand interaction detected (PLIP)MG.156: 5 residues within 4Å:- Chain A: C.902, G.903, G.905, U.1373, U.1374
No protein-ligand interaction detected (PLIP)MG.157: 2 residues within 4Å:- Chain A: U.1066, U.1069
No protein-ligand interaction detected (PLIP)MG.158: 2 residues within 4Å:- Chain A: G.900, C.1052
No protein-ligand interaction detected (PLIP)MG.159: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.160: 6 residues within 4Å:- Chain A: G.1036, G.1040, G.1041, C.1042, G.1180, U.1181
No protein-ligand interaction detected (PLIP)MG.161: 5 residues within 4Å:- Chain A: G.62, U.63, G.99, C.100
- Ligands: MG.354
No protein-ligand interaction detected (PLIP)MG.162: 3 residues within 4Å:- Chain A: G.560, G.742, G.805
No protein-ligand interaction detected (PLIP)MG.163: 3 residues within 4Å:- Chain A: G.28, G.29
- Ligands: MG.231
No protein-ligand interaction detected (PLIP)MG.164: 3 residues within 4Å:- Chain A: A.1306, C.1345
- Chain M: G.99
No protein-ligand interaction detected (PLIP)MG.165: 2 residues within 4Å:- Chain A: G.1400, G.1460
No protein-ligand interaction detected (PLIP)MG.166: 2 residues within 4Å:- Chain A: G.525, G.526
No protein-ligand interaction detected (PLIP)MG.167: 2 residues within 4Å:- Chain A: G.809, G.852
No protein-ligand interaction detected (PLIP)MG.168: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.169: 3 residues within 4Å:- Chain A: A.946, A.947, C.948
No protein-ligand interaction detected (PLIP)MG.170: 4 residues within 4Å:- Chain A: U.1073, U.1074, G.1077, U.1078
No protein-ligand interaction detected (PLIP)MG.171: 3 residues within 4Å:- Chain A: G.769, G.770, U.777
No protein-ligand interaction detected (PLIP)MG.172: 1 residues within 4Å:- Chain A: G.1447
No protein-ligand interaction detected (PLIP)MG.173: 1 residues within 4Å:- Chain A: A.345
No protein-ligand interaction detected (PLIP)MG.174: 1 residues within 4Å:- Chain A: G.1368
No protein-ligand interaction detected (PLIP)MG.175: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.176: 2 residues within 4Å:- Ligands: MG.220, MG.282
No protein-ligand interaction detected (PLIP)MG.177: 2 residues within 4Å:- Chain A: G.1282, G.1316
No protein-ligand interaction detected (PLIP)MG.178: 2 residues within 4Å:- Chain A: G.749, C.796
No protein-ligand interaction detected (PLIP)MG.179: 2 residues within 4Å:- Chain A: C.1128, A.1129
No protein-ligand interaction detected (PLIP)MG.180: 1 residues within 4Å:- Chain A: C.950
No protein-ligand interaction detected (PLIP)MG.181: 6 residues within 4Å:- Chain A: G.675, U.676
- Chain K: N.16, G.42, S.43, K.45
1 PLIP interactions:1 interactions with chain K- Metal complexes: K:N.16
MG.182: 4 residues within 4Å:- Chain A: G.101, G.320, A.321, G.322
No protein-ligand interaction detected (PLIP)MG.183: 1 residues within 4Å:- Chain A: A.799
No protein-ligand interaction detected (PLIP)MG.184: 3 residues within 4Å:- Chain A: G.320, G.322, A.323
No protein-ligand interaction detected (PLIP)MG.185: 3 residues within 4Å:- Chain A: U.773, A.774, G.775
No protein-ligand interaction detected (PLIP)MG.186: 2 residues within 4Å:- Chain A: A.1029, G.1030
No protein-ligand interaction detected (PLIP)MG.187: 3 residues within 4Å:- Chain A: G.541, G.542
- Ligands: K.301
No protein-ligand interaction detected (PLIP)MG.188: 2 residues within 4Å:- Chain A: C.940, U.1035
No protein-ligand interaction detected (PLIP)MG.189: 3 residues within 4Å:- Chain A: G.711
- Ligands: MG.196, MG.220
No protein-ligand interaction detected (PLIP)MG.190: 3 residues within 4Å:- Chain A: G.70, G.71, U.93
No protein-ligand interaction detected (PLIP)MG.191: 1 residues within 4Å:- Chain A: G.576
No protein-ligand interaction detected (PLIP)MG.192: 1 residues within 4Å:- Chain A: G.1248
No protein-ligand interaction detected (PLIP)MG.193: 3 residues within 4Å:- Chain A: A.592, G.594, G.614
No protein-ligand interaction detected (PLIP)MG.194: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.195: 2 residues within 4Å:- Chain A: U.300, G.301
No protein-ligand interaction detected (PLIP)MG.196: 1 residues within 4Å:- Ligands: MG.189
No protein-ligand interaction detected (PLIP)MG.197: 3 residues within 4Å:- Chain A: G.578, G.579, U.625
No protein-ligand interaction detected (PLIP)MG.198: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.199: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.200: 5 residues within 4Å:- Chain A: G.1067, U.1068, U.1069, G.1082, C.1083
No protein-ligand interaction detected (PLIP)MG.201: 2 residues within 4Å:- Chain A: U.1108, U.1263
No protein-ligand interaction detected (PLIP)MG.202: 4 residues within 4Å:- Chain A: G.251, U.252, G.262
- Chain Q: I.64
No protein-ligand interaction detected (PLIP)MG.203: 3 residues within 4Å:- Chain A: C.703, G.705, A.706
No protein-ligand interaction detected (PLIP)MG.204: 2 residues within 4Å:- Chain A: C.912, U.1327
No protein-ligand interaction detected (PLIP)MG.205: 1 residues within 4Å:- Chain A: G.251
No protein-ligand interaction detected (PLIP)MG.206: 2 residues within 4Å:- Chain A: U.82, U.83
No protein-ligand interaction detected (PLIP)MG.207: 2 residues within 4Å:- Ligands: MG.214, MG.215
No protein-ligand interaction detected (PLIP)MG.208: 4 residues within 4Å:- Chain A: C.368, U.371, G.372, U.383
No protein-ligand interaction detected (PLIP)MG.209: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.210: 2 residues within 4Å:- Chain A: U.235
- Ligands: MG.262
No protein-ligand interaction detected (PLIP)MG.211: 1 residues within 4Å:- Chain A: U.123
No protein-ligand interaction detected (PLIP)MG.212: 1 residues within 4Å:- Chain A: A.786
No protein-ligand interaction detected (PLIP)MG.213: 3 residues within 4Å:- Chain A: G.757, G.758, G.787
No protein-ligand interaction detected (PLIP)MG.214: 1 residues within 4Å:- Ligands: MG.207
No protein-ligand interaction detected (PLIP)MG.215: 1 residues within 4Å:- Ligands: MG.207
No protein-ligand interaction detected (PLIP)MG.216: 1 residues within 4Å:- Chain A: G.69
No protein-ligand interaction detected (PLIP)MG.217: 2 residues within 4Å:- Ligands: MG.139, MG.239
No protein-ligand interaction detected (PLIP)MG.218: 3 residues within 4Å:- Chain A: G.32, C.49
- Ligands: MG.219
No protein-ligand interaction detected (PLIP)MG.219: 2 residues within 4Å:- Chain A: C.49
- Ligands: MG.218
No protein-ligand interaction detected (PLIP)MG.220: 4 residues within 4Å:- Chain A: A.713
- Ligands: MG.176, MG.189, MG.221
No protein-ligand interaction detected (PLIP)MG.221: 2 residues within 4Å:- Chain A: G.802
- Ligands: MG.220
No protein-ligand interaction detected (PLIP)MG.222: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.223: 3 residues within 4Å:- Chain A: U.1066, G.1067, U.1068
No protein-ligand interaction detected (PLIP)MG.224: 3 residues within 4Å:- Chain A: G.305, G.306
- Ligands: MG.38
No protein-ligand interaction detected (PLIP)MG.225: 2 residues within 4Å:- Chain A: G.297, G.298
No protein-ligand interaction detected (PLIP)MG.226: 1 residues within 4Å:- Chain A: U.290
No protein-ligand interaction detected (PLIP)MG.227: 3 residues within 4Å:- Chain A: C.779, C.780, U.1484
No protein-ligand interaction detected (PLIP)MG.228: 1 residues within 4Å:- Chain A: G.807
No protein-ligand interaction detected (PLIP)MG.229: 2 residues within 4Å:- Chain A: U.741
- Ligands: MG.230
No protein-ligand interaction detected (PLIP)MG.230: 1 residues within 4Å:- Ligands: MG.229
No protein-ligand interaction detected (PLIP)MG.231: 2 residues within 4Å:- Chain A: G.30
- Ligands: MG.163
No protein-ligand interaction detected (PLIP)MG.232: 3 residues within 4Å:- Chain A: G.141, G.142
- Ligands: MG.233
No protein-ligand interaction detected (PLIP)MG.233: 5 residues within 4Å:- Chain A: G.140, G.141, A.204
- Ligands: MG.232, MG.234
No protein-ligand interaction detected (PLIP)MG.234: 4 residues within 4Å:- Chain A: A.138, G.139, A.203
- Ligands: MG.233
No protein-ligand interaction detected (PLIP)MG.235: 4 residues within 4Å:- Chain A: A.278, C.279
- Ligands: MG.236, MG.237
No protein-ligand interaction detected (PLIP)MG.236: 2 residues within 4Å:- Ligands: MG.235, MG.237
No protein-ligand interaction detected (PLIP)MG.237: 4 residues within 4Å:- Chain A: C.244, C.279
- Ligands: MG.235, MG.236
No protein-ligand interaction detected (PLIP)MG.238: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.239: 2 residues within 4Å:- Ligands: MG.139, MG.217
No protein-ligand interaction detected (PLIP)MG.240: 1 residues within 4Å:- Chain A: G.422
No protein-ligand interaction detected (PLIP)MG.241: 1 residues within 4Å:- Ligands: MG.242
No protein-ligand interaction detected (PLIP)MG.242: 1 residues within 4Å:- Ligands: MG.241
No protein-ligand interaction detected (PLIP)MG.243: 1 residues within 4Å:- Chain A: G.134
No protein-ligand interaction detected (PLIP)MG.244: 5 residues within 4Å:- Chain A: G.247, U.248, G.262, C.263, C.264
No protein-ligand interaction detected (PLIP)MG.245: 2 residues within 4Å:- Chain A: C.188, G.191
No protein-ligand interaction detected (PLIP)MG.246: 2 residues within 4Å:- Chain A: A.54, A.349
No protein-ligand interaction detected (PLIP)MG.247: 4 residues within 4Å:- Chain A: G.1206, A.1207, C.1304
- Chain M: Q.100
No protein-ligand interaction detected (PLIP)MG.248: 1 residues within 4Å:- Chain A: G.694
No protein-ligand interaction detected (PLIP)MG.249: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.250: 1 residues within 4Å:- Ligands: MG.107
No protein-ligand interaction detected (PLIP)MG.251: 3 residues within 4Å:- Chain A: U.899, G.900, U.1376
No protein-ligand interaction detected (PLIP)MG.252: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.253: 2 residues within 4Å:- Chain A: G.1275, G.1276
No protein-ligand interaction detected (PLIP)MG.254: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.255: 4 residues within 4Å:- Chain A: G.682, C.683, G.782, G.783
No protein-ligand interaction detected (PLIP)MG.256: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.257: 2 residues within 4Å:- Chain A: U.689, A.690
No protein-ligand interaction detected (PLIP)MG.258: 4 residues within 4Å:- Chain A: C.801, G.802, C.1505, U.1506
No protein-ligand interaction detected (PLIP)MG.259: 1 residues within 4Å:- Chain A: U.257
No protein-ligand interaction detected (PLIP)MG.260: 1 residues within 4Å:- Chain A: G.617
No protein-ligand interaction detected (PLIP)MG.261: 3 residues within 4Å:- Chain A: C.685, A.686, G.687
No protein-ligand interaction detected (PLIP)MG.262: 1 residues within 4Å:- Ligands: MG.210
No protein-ligand interaction detected (PLIP)MG.263: 1 residues within 4Å:- Chain A: U.80
No protein-ligand interaction detected (PLIP)MG.264: 1 residues within 4Å:- Chain A: G.280
No protein-ligand interaction detected (PLIP)MG.265: 1 residues within 4Å:- Chain A: A.294
No protein-ligand interaction detected (PLIP)MG.266: 4 residues within 4Å:- Chain A: U.1397, G.1398, G.1399, U.1463
No protein-ligand interaction detected (PLIP)MG.267: 4 residues within 4Å:- Chain A: G.929, U.930, C.948, C.1212
No protein-ligand interaction detected (PLIP)MG.268: 4 residues within 4Å:- Chain A: G.16, A.17, U.898, A.1379
No protein-ligand interaction detected (PLIP)MG.269: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.270: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.271: 2 residues within 4Å:- Chain A: G.802, A.850
No protein-ligand interaction detected (PLIP)MG.272: 1 residues within 4Å:- Chain A: G.77
No protein-ligand interaction detected (PLIP)MG.273: 3 residues within 4Å:- Chain A: A.325, G.328, G.329
No protein-ligand interaction detected (PLIP)MG.274: 2 residues within 4Å:- Chain A: A.1509, U.1510
No protein-ligand interaction detected (PLIP)MG.275: 2 residues within 4Å:- Chain A: G.904, C.1521
No protein-ligand interaction detected (PLIP)MG.276: 1 residues within 4Å:- Chain A: G.641
No protein-ligand interaction detected (PLIP)MG.277: 3 residues within 4Å:- Chain A: U.6, G.7
- Chain D: S.82
1 PLIP interactions:1 interactions with chain D- Metal complexes: D:S.82
MG.278: 3 residues within 4Å:- Chain A: G.1508, A.1509, U.1510
No protein-ligand interaction detected (PLIP)MG.279: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.280: 2 residues within 4Å:- Chain A: G.905, A.1481
No protein-ligand interaction detected (PLIP)MG.281: 1 residues within 4Å:- Chain A: G.1498
No protein-ligand interaction detected (PLIP)MG.282: 2 residues within 4Å:- Chain A: G.711
- Ligands: MG.176
No protein-ligand interaction detected (PLIP)MG.283: 4 residues within 4Å:- Chain A: U.46, G.47, G.390
- Ligands: MG.142
No protein-ligand interaction detected (PLIP)MG.284: 2 residues within 4Å:- Chain A: U.38, G.39
No protein-ligand interaction detected (PLIP)MG.285: 2 residues within 4Å:- Chain A: C.1492
- Ligands: MG.286
No protein-ligand interaction detected (PLIP)MG.286: 2 residues within 4Å:- Chain A: G.880
- Ligands: MG.285
No protein-ligand interaction detected (PLIP)MG.331: 5 residues within 4Å:- Chain A: U.1312
- Chain M: T.19, I.21, Y.22, I.24
3 PLIP interactions:3 interactions with chain M- Metal complexes: M:T.19, M:I.21, M:I.24
MG.332: 4 residues within 4Å:- Chain C: F.127, A.128, V.129, G.157
No protein-ligand interaction detected (PLIP)MG.334: 5 residues within 4Å:- Chain D: A.81, S.82, K.84, G.86, T.88
2 PLIP interactions:1 interactions with chain D, 1 Ligand-Water interactions- Metal complexes: D:T.88, H2O.8
MG.335: 1 residues within 4Å:- Chain E: E.64
No protein-ligand interaction detected (PLIP)MG.337: 3 residues within 4Å:- Chain F: R.80, R.82, V.85
3 PLIP interactions:3 interactions with chain F- Metal complexes: F:R.80, F:R.82, F:V.85
MG.338: 2 residues within 4Å:- Chain G: Q.105, K.136
No protein-ligand interaction detected (PLIP)MG.340: 1 residues within 4Å:- Chain H: R.105
No protein-ligand interaction detected (PLIP)MG.341: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.342: 1 residues within 4Å:- Chain L: E.12
No protein-ligand interaction detected (PLIP)MG.343: 1 residues within 4Å:- Chain L: Q.74
No protein-ligand interaction detected (PLIP)MG.345: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.346: 1 residues within 4Å:- Chain P: R.57
No protein-ligand interaction detected (PLIP)MG.347: 1 residues within 4Å:- Chain P: L.49
No protein-ligand interaction detected (PLIP)MG.348: 1 residues within 4Å:- Chain P: K.35
No protein-ligand interaction detected (PLIP)MG.349: 3 residues within 4Å:- Chain Q: D.12, M.14, E.48
4 PLIP interactions:4 interactions with chain Q- Metal complexes: Q:D.12, Q:M.14, Q:E.48, Q:E.48
MG.350: 1 residues within 4Å:- Chain Q: V.8
No protein-ligand interaction detected (PLIP)MG.351: 4 residues within 4Å:- Chain A: U.933, C.1208, A.1209
- Chain S: R.80
No protein-ligand interaction detected (PLIP)MG.352: 1 residues within 4Å:- Chain S: R.80
No protein-ligand interaction detected (PLIP)MG.353: 3 residues within 4Å:- Chain A: U.1295
- Chain S: K.5, K.6
1 PLIP interactions:1 interactions with chain S- Metal complexes: S:K.5
MG.354: 3 residues within 4Å:- Chain T: S.4, A.5
- Ligands: MG.161
1 PLIP interactions:1 interactions with chain T- Metal complexes: T:S.4
MG.355: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.356: 1 residues within 4Å:- Chain V: A.8
No protein-ligand interaction detected (PLIP)- 46 x K: POTASSIUM ION(Non-functional Binders)(Non-covalent)
K.287: 2 residues within 4Å:- Chain A: U.128, U.225
Ligand excluded by PLIPK.288: 3 residues within 4Å:- Chain A: U.841, C.844, G.845
Ligand excluded by PLIPK.289: 1 residues within 4Å:- Chain A: U.797
Ligand excluded by PLIPK.290: 1 residues within 4Å:- Ligands: MG.45
Ligand excluded by PLIPK.291: 2 residues within 4Å:- Chain A: G.560, G.561
Ligand excluded by PLIPK.292: 1 residues within 4Å:- Ligands: MG.125
Ligand excluded by PLIPK.293: 2 residues within 4Å:- Chain A: G.1071, G.1072
Ligand excluded by PLIPK.294: 2 residues within 4Å:- Chain A: G.822, C.824
Ligand excluded by PLIPK.295: 2 residues within 4Å:- Chain A: U.15, U.18
Ligand excluded by PLIPK.296: 2 residues within 4Å:- Chain A: C.520
- Ligands: MG.145
Ligand excluded by PLIPK.297: 1 residues within 4Å:- Chain A: G.434
Ligand excluded by PLIPK.298: 0 residues within 4Å:- (No contacts)
Ligand excluded by PLIPK.299: 1 residues within 4Å:- Chain A: U.199
Ligand excluded by PLIPK.300: 3 residues within 4Å:- Chain A: A.458, G.459, G.460
Ligand excluded by PLIPK.301: 2 residues within 4Å:- Chain A: G.542
- Ligands: MG.187
Ligand excluded by PLIPK.302: 1 residues within 4Å:- Chain A: G.1168
Ligand excluded by PLIPK.303: 2 residues within 4Å:- Chain A: G.672, G.684
Ligand excluded by PLIPK.304: 1 residues within 4Å:- Chain A: G.243
Ligand excluded by PLIPK.305: 2 residues within 4Å:
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.45 Å
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 1 x A- A- 6MZ- U- U- U: RNA (5'-D(*AP*AP*(MA6)P*UP*UP*U)-3')(Non-covalent)
- 6 x PAR: PAROMOMYCIN(Non-functional Binders)(Non-covalent)
- 301 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
- 46 x K: POTASSIUM ION(Non-functional Binders)(Non-covalent)