SMTL ID : 3l2v.1

Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with manganese and MK0518 (Raltegravir)

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 3.20 Å
Oligo State
homo-tetramer
Ligands
2 x ZN: ZINC ION(Non-covalent)
6 x MN: MANGANESE (II) ION(Non-covalent)
2 x NH4: AMMONIUM ION(Non-functional Binders)
2 x RLT: N-(4-FLUOROBENZYL)-5-HYDROXY-1-METHYL-2-(1-METHYL-1-{[(5-METHYL-1,3,4-OXADIAZOL-2-YL)CARBONYL]AMINO}ETHYL)-6-OXO-1,6-DIHYDROPYRIMIDINE-4-CARBOXAMIDE(Non-covalent)
8 x GOL: GLYCEROL(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Hare, S. et al., Retroviral intasome assembly and inhibition of DNA strand transfer. Nature (2010)
Release Date
2010-02-09
Peptides
Integrase: ABEF
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
E
A
F
B