SMTL ID : 3tjs.1

Crystal Structure of the complex between human cytochrome P450 3A4 and desthiazolylmethyloxycarbonyl ritonavir

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 30 residues within 4Å: Chain A: R.85, I.98, S.99, W.106, R.110, F.117, I.281, F.282, A.285, G.286, T.289, V.293, L.344, I.349, A.350, L.353, R.355, P.414, F.415, G.416, S.417, R.420, N.421, C.422, I.423, G.424, F.427, A.428, M.432 Ligands: D0R.2 24 PLIP interactions: 24 interactions with chain A, Hydrophobic interactions: A:I.98, A:F.117, A:I.281, A:F.282, A:A.285, A:V.293, A:L.344, A:I.349, A:A.350, A:L.353, A:F.415, A:F.415, A:I.423, A:F.427, A:A.428 Hydrogen bonds: A:S.417, A:S.417 Water bridges: A:R.355 Salt bridges: A:R.85, A:R.85, A:R.110, A:R.355, A:R.420 Metal complexes: A:C.422

1 x D0R: N-[(2S,4S,5S)-5-amino-4-hydroxy-1,6-diphenylhexan-2-yl]-N~2~-(methyl{[2-(propan-2-yl)-1,3-thiazol-4-yl]methyl}carbamoyl)-L-valinamide(Non-covalent)

D0R.2: 11 residues within 4Å: Chain A: F.88, S.99, L.190, I.281, F.284, A.285, T.289, I.349, A.350, G.461 Ligands: HEM.1 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.88, A:L.190, A:I.281, A:F.284, A:F.284, A:F.284, A:T.289, A:A.350 Hydrogen bonds: A:S.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sevrioukova, I.F. et al., Interaction of human cytochrome P4503A4 with ritonavir analogs. Arch.Biochem.Biophys. (2012)

Release Date

2012-03-07

Peptides

Cytochrome P450 3A4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cytochrome P450 3A4

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