SMTL ID : 4k9x.1

Complex of human CYP3A4 with a desoxyritonavir analog

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.76 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 26 residues within 4Å: Chain A: R.85, I.98, S.99, W.106, R.110, F.282, A.285, T.289, V.293, I.349, A.350, L.353, R.355, P.414, F.415, G.416, S.417, R.420, N.421, C.422, I.423, G.424, F.427, A.428, M.432 Ligands: 8AW.2 18 PLIP interactions: 18 interactions with chain A, Hydrophobic interactions: A:I.98, A:F.282, A:A.285, A:V.293, A:I.349, A:A.350, A:L.353, A:F.415, A:F.415, A:I.423, A:F.427 Hydrogen bonds: A:S.417 Salt bridges: A:R.85, A:R.85, A:R.110, A:R.355, A:R.420 Metal complexes: A:C.422

1 x 8AW: 1,3-thiazol-5-ylmethyl [(2R,5R)-5-{[(2S)-2-methylbutanoyl]amino}-1,6-diphenylhexan-2-yl]carbamate(Non-covalent)

8AW.2: 14 residues within 4Å: Chain A: R.85, R.86, F.88, S.99, L.190, L.191, F.221, I.281, F.284, A.285, T.289, E.354, L.462 Ligands: HEM.1 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.88, A:L.190, A:L.191, A:L.191, A:F.221, A:F.221, A:I.281, A:L.462 Hydrogen bonds: A:S.99 pi-Stacking: A:F.284

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sevrioukova, I.F. et al., Dissecting Cytochrome P450 3A4-Ligand Interactions Using Ritonavir Analogues. Biochemistry (2013)

Release Date

2013-06-19

Peptides

Cytochrome P450 3A4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cytochrome P450 3A4

Related Entries With Identical Sequence