SMTL ID : 4k9w.1 (3 other biounits)

Complex of human CYP3A4 with a desoxyritonavir analog

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 29 residues within 4Å: Chain A: R.85, I.98, S.99, W.106, R.110, F.117, I.164, F.282, A.285, T.289, V.293, L.344, I.349, A.350, L.353, R.355, P.414, F.415, G.416, S.417, R.420, N.421, C.422, I.423, G.424, F.427, A.428, M.432 Ligands: 7AW.2 24 PLIP interactions: 24 interactions with chain A, Hydrophobic interactions: A:I.98, A:F.117, A:I.164, A:F.282, A:A.285, A:T.289, A:V.293, A:L.344, A:I.349, A:I.349, A:A.350, A:L.353, A:F.415, A:F.415, A:F.427, A:A.428 Hydrogen bonds: A:S.417, A:S.417 Salt bridges: A:R.85, A:R.85, A:R.110, A:R.355, A:R.420 Metal complexes: A:C.422

1 x 7AW: N~2~-(methyl{[2-(propan-2-yl)-1,3-thiazol-4-yl]methyl}carbamoyl)-N-[(2R,5S)-1-phenyl-5-{[(1,3-thiazol-5-ylmethoxy)carbonyl]amino}octan-2-yl]-L-valinamide(Non-covalent)

7AW.2: 20 residues within 4Å: Chain A: Y.33, F.37, D.56, R.85, R.86, F.88, S.99, L.190, L.191, F.193, F.195, T.204, F.221, I.281, A.285, T.289, I.349, E.354, L.462 Ligands: HEM.1 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:Y.33, A:F.88, A:L.190, A:L.191, A:F.193, A:F.193, A:F.221, A:L.462 Hydrogen bonds: A:S.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sevrioukova, I.F. et al., Dissecting Cytochrome P450 3A4-Ligand Interactions Using Ritonavir Analogues. Biochemistry (2013)

Release Date

2013-06-19

Peptides

Cytochrome P450 3A4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cytochrome P450 3A4

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