SMTL ID : 3zw8.1

Crystal Structure Of Rat Peroxisomal Multifunctional Enzyme Type 1 (rpMFE1) In Apo Form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 10 residues within 4Å: Chain A: A.81, G.92, E.123, E.143, L.149, P.150, G.151, A.152, F.275 Ligands: SO4.2 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.120, A:E.123, A:G.151, A:A.152

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 10 residues within 4Å: Chain A: A.79, G.80, A.81, F.86, G.119, G.120, P.142, E.143, I.148 Ligands: GOL.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.81, A:G.120, A:E.143 SO4.3: 3 residues within 4Å: Chain A: R.572, G.573, N.574 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.574 SO4.4: 4 residues within 4Å: Chain A: P.211, I.212, E.213, R.216 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:I.212, A:E.213 Salt bridges: A:R.216 SO4.5: 7 residues within 4Å: Chain B: G.80, A.81, F.86, G.119, G.120, P.142, E.143 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:A.81, B:G.120, B:E.143 SO4.6: 4 residues within 4Å: Chain A: W.614 Chain B: G.325, T.326, R.329 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:T.326, B:R.329 SO4.7: 4 residues within 4Å: Chain B: P.211, I.212, E.213, R.216 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:I.212, B:E.213 Salt bridges: B:R.216

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kasaragod, P. et al., The Isomerase and Hydratase Reaction Mechanism of the Crotonase Active Site of the Multifunctional Enzyme (Type-1), as Deduced from Structures of Complexes with 3S-Hydroxy- Acyl-Coa. FEBS J. (2013)

Release Date

2012-08-08

Peptides

PEROXISOMAL BIFUNCTIONAL ENZYME: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

PEROXISOMAL BIFUNCTIONAL ENZYME

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