SMTL ID : 3zwa.1 (1 other biounit)

CRYSTAL STRUCTURE OF RAT PEROXISOMAL MULTIFUNCTIONAL ENZYME TYPE 1 (RPMFE1) COMPLEXED WITH 3S-HYDROXY-HEXANOYL-COA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.47 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: H.20, E.23, R.35, C.37 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:H.20, A:E.23, A:R.35, A:R.35

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: S.281, G.282 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.282 Water bridges: A:Q.283 SO4.3: 6 residues within 4Å: Chain A: G.325, T.326, M.327, G.328, A.400, V.401 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.326, A:T.326, A:M.327, A:G.328 SO4.5: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

1 x 3H9: (S)-3-Hydroxyhexanoyl-CoA(Non-covalent)

3H9.4: 25 residues within 4Å: Chain A: P.40, V.41, A.43, A.79, G.80, A.81, D.82, I.83, F.86, G.92, V.116, L.118, G.119, G.120, E.123, R.138, P.142, E.143, L.146, L.149, P.150, G.151, A.152, Y.176, F.275 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:A.79, A:A.81, A:I.83, A:V.116, A:V.116, A:L.118, A:E.143, A:F.275 Hydrogen bonds: A:A.79, A:A.81, A:A.81, A:I.83, A:G.120, A:E.143, A:G.151, A:A.152, A:Y.176

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kasaragod, P. et al., The Isomerase and Hydratase Reaction Mechanism of the Crotonase Active Site of the Multifunctional Enzyme (Type-1), as Deduced from Structures of Complexes with 3S-Hydroxy- Acyl-Coa. FEBS J. (2013)

Release Date

2012-08-08

Peptides

PEROXISOMAL BIFUNCTIONAL ENZYME: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PEROXISOMAL BIFUNCTIONAL ENZYME

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