SMTL ID : 4uer.1

40S-eIF1-eIF1A-eIF3-eIF3j translation initiation complex from Lachancea kluyveri

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 6.47 Å

Oligo State

hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain F: C.22, C.25, C.73, C.76 4 PLIP interactions: 4 interactions with chain F Metal complexes: F:C.22, F:C.25, F:C.73, F:C.76 ZN.2: 5 residues within 4Å: Chain G: C.36, C.39, C.55, C.58, T.60 3 PLIP interactions: 3 interactions with chain G Metal complexes: G:C.36, G:C.55, G:C.58 ZN.3: 6 residues within 4Å: Chain J: C.40, N.42, C.45, C.60, C.63, V.66 4 PLIP interactions: 4 interactions with chain J Metal complexes: J:C.40, J:C.45, J:C.60, J:C.63 ZN.4: 4 residues within 4Å: Chain X: C.18, C.21, C.36, C.39 4 PLIP interactions: 4 interactions with chain X Metal complexes: X:C.18, X:C.21, X:C.36, X:C.39

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Aylett, C.H.S. et al., Structure of a Yeast 40S-Eif1-Eif1A-Eif3-Eif3J Initiation Complex. Nat.Struct.Mol.Biol. (2015)

Release Date

2015-02-11

Peptides

EIF1A: A
ES28: B
ES8: C
ES7: D
ES1: E
ES26: F
ES27: G
ES10: H
ES25: I
ES31: J
US2: L
US3: M
US4: N
US5: O
EIF1: P
US7: Q
US8: R
US9: S
US10: T
US11: U
US12: V
US13: W
US14: X
US15: Y
ES24: Z
US17: 0
RACK1: 1
US19: 2
ES19: 3
ES12: 4
ES17: 5
ES4: 6
ES30: 7
ES6: 8
ES21: 9
EIF3A: a
EIF3B: b
EIF3C: c

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
0

B
1

C
2

D
3

E
4

F
5

G
6

H
7

I
8

J
9

L
B

M
C

N
D

O
E

P
F

Q
G

R
H

S
I

T
J

U
K

V
L

W
M

X
N

Y
O

Z
P

0
Q

1
R

2
S

3
T

4
U

5
V

6
W

7
X

8
Y

9
Z

a
a

b
b

c
c

EIF1A

ES28

ES8

ES7

ES1

ES26

ES27

ES10

ES25

ES31

US2

US3

US4

US5

EIF1

US7

US8

US9

US10

US11

US12

US13

US14

US15

ES24

US17

RACK1

US19

ES19

ES12

ES17

ES4

ES30

ES6

ES21

EIF3A

EIF3B

EIF3C

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